RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 METTL21AQ8WXB1 218 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ABCB10Q9NRK6 738 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ENTPD6O75354 484 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 AKR1A1P14550 325 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 HTR2AP28223 471 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SNTA1Q13424 505 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 KCTD19Q17RG1 926 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 C1orf186Q6ZWK4 172 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MON1AQ86VX9 555 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 CARNMT1Q8N4J0 409 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 POTEKPQ9BYX7 375 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 CD248Q9HCU0 757 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ADARB2Q9NS39 739 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 PAK1IP1Q9NWT1 392 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 AP4B1Q9Y6B7 739 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 OR6C75A6NL08 312 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 EML1O00423 815 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 RP2O75695 350 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TPTEP56180 551 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TRIM32Q13049 653 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MAB21L1Q13394 359 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 KCNA10Q16322 511 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SLC9A4Q6AI14 798 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 GCNT7Q6ZNI0 430 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SLC26A9Q7LBE3 791 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 PLEKHH3Q7Z736 793 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 OR4L1Q8NH43 312 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ZFAND2BQ8WV99 257 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 GEMIN6Q8WXD5 167 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 AZIN2Q96A70 460 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ASB9Q96DX5 294 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ZSWIM3Q96MP5 696 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 APBA2Q99767 749 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TLR10Q9BXR5 811 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF717Q9BY31 904 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 LGALS13Q9UHV8 139 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 VAPBO95292 243 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ACTA2P62736 377 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ACTG2P63267 376 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MAMLD1Q13495 774 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF181Q2M3W8 571 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 XKR6Q5GH73 641 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 GALNT15Q8N3T1 639 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TOP6BLQ8N6T0 577 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 COPS8Q99627 209 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SAV1Q9H4B6 383 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 B3GAT2Q9NPZ5 323 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 LYARQ9NX58 379 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SPTAN1Q13813 2472 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF701M0R085 212 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 PRKYO43930 277 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ANGPTL1O95841 491 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 CDK2P24941 298 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 DDX6P26196 483 aaKnown RBP eCLIP6.02□□□□□ -1.451e-8■□□□□ 11.1
VPS13D-201ENST00000011700 MPIP34949 423 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 GLRBP48167 497 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SMU1Q2TAY7 513 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TMEM119Q4V9L6 283 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 HSDL2Q6YN16 418 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 USP30Q70CQ3 517 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 GPIHBP1Q8IV16 184 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 REPS2Q8NFH8 660 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 BPIFB6Q8NFQ5 453 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 FAM163AQ96GL9 167 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MARK4Q96L34 752 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 PDE10AQ9Y233 779 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 IFNA1P01562 189 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MT-ND2P03891 347 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 DNTTP04053 509 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 KCNJ1P48048 391 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 POLR2JP52435 117 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ALG10BQ5I7T1 473 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MEDAGQ5VYS4 303 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 GPR135Q8IZ08 494 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 CXorf40AQ8TE69 158 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ITPKCQ96DU7 683 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 DCUN1D5Q9BTE7 237 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ABCD2Q9UBJ2 740 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 USP27XA6NNY8 438 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ADAMTS3O15072 1205 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ALOX15BO15296 676 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 RAP2AP10114 183 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 PWP1Q13610 501 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 AUHQ13825 339 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 KCNC3Q14003 757 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ACOT1Q86TX2 421 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SNX33Q8WV41 574 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 OR8D1Q8WZ84 308 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 PHF21BQ96EK2 531 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 OR2B2Q9GZK3 357 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 KATNBL1Q9H079 304 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 KIAA1522Q9P206 1035 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 C14orf166Q9Y224 244 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TELO2Q9Y4R8 837 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MAB21L2Q9Y586 359 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 PDLIM1O00151 329 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ELFN1P0C7U0 828 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 ATF4P18848 351 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 SLC7A1P30825 629 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 MTHFRP42898 656 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms