RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rsph14Q9D3W1 341 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dnajb4Q9D832 337 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PgdQ9DCD0 483 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PollQ9QXE2 573 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp277E9Q6D6 583 aaKnown RBP10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cer1O55233 272 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 StradaQ3UUJ4 431 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Stxbp5lQ5DQR4 1185 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dlx3Q64205 287 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PtprjQ64455 1238 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tatdn1Q6P8M1 295 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Clec4b1Q7TS58 209 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Luzp2Q8BGY3 345 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Catsper4Q8BVN3 442 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Panx3Q8CEG0 392 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Myoz3Q8R4E4 245 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Idh3bQ91VA7 384 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 QpctQ9CYK2 362 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rnf225Q9D7D1 332 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dtwd1Q9D8U7 304 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TrmuQ9DAT5 417 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc19a2Q9EQN9 498 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Deaf1Q9Z1T5 566 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dio2Q9Z1Y9 266 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 EvplQ9D952 2035 aa10.2□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Myh7bA2AQP0 1941 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 2610021A01RikE9Q0Q3 834 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 DldO08749 509 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 P06324 132 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rc3h2P0C090 1187 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CatP24270 527 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gad2P48320 585 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Plk2P53351 682 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Bmp1P98063 991 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem63bQ3TWI9 832 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tprg1Q8CB49 279 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm42417Q8K1D0 126 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gulp1Q8K2A1 304 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Txndc11Q8K2W3 948 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Oit3Q8R4V5 546 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr853Q8VGG6 305 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pcdhb4Q91XZ6 784 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dnajb2Q9QYI5 324 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyp2a22B2RXZ2 492 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Polr3bP59470 1133 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nploc4P60670 608 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Q32P12 615 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Q5XFZ0 217 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 MarcoQ60754 518 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dalrd3Q6PJN8 538 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tas2r38Q7TQA6 331 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Mapk15Q80Y86 549 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 ToporsQ80Z37 1033 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr690Q8VH18 315 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cep97Q9CZ62 856 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Aif1lQ9EQX4 150 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 St6galnac1Q9QZ39 526 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Scgb2b17S4R2V3 82 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CidecP56198 239 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cpne9Q1RLL3 553 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nr2f1Q60632 422 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Insm1Q63ZV0 521 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Znf366Q6NS86 746 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rexo4Q6PAQ4 432 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem164Q6PHN7 296 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Klhl17Q6TDP3 640 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cyth4Q80YW0 393 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ubp1Q811S7 540 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fam131aQ8BWU3 361 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp709Q8VC29 727 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 KptnQ8VCX6 430 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 AslQ91YI0 464 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Bbox1Q924Y0 387 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 St7Q99M96 577 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 EefsecQ9JHW4 583 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Il20Q9JKV9 176 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Brwd3A2AHJ4 1799 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Wdr95D3Z7A8 784 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ebf3O08791 596 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gstm1P10649 218 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CtsdP18242 410 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PnmtP40935 295 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Scarf2P59222 833 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Csnk2bP67871 215 aaKnown RBP10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem173Q3TBT3 378 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Eri2Q5BKS4 688 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pcsk7Q61139 770 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Slc39a9Q8BFU1 308 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Satb2Q8VI24 733 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dok4Q99KE3 325 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Vmp1Q99KU0 406 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 TpbpbQ9CQC0 121 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Asf1aQ9CQE6 204 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Myh15E9Q264 1925 aa10.19□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp969A2ART2 485 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp973A2BE20 318 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ptrhd1D3Z4S3 140 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm7535F7CXE4 302 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm6337K7N6X9 211 aa10.18□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm3115L7N285 211 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms