RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 NaprtQ8CC86 538 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ppwd1Q8CEC6 646 aaKnown RBP9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 TbccQ8VCN9 341 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 MiosQ8VE19 875 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pcdhb18Q91Y02 792 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ankra2Q99PE2 312 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Mrto4Q9D0I8 239 aaKnown RBP9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Mfsd10Q9D2V8 456 aaKnown RBP9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ddi1Q9DAF3 408 aa9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ehd1Q9WVK4 534 aaKnown RBP9.84□□□□□ -0.83
Ldlr-201ENSMUST00000034713 4933424G06RikA0A140LIP3 267 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fam43bA2AM80 330 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fam155bA2BDP1 471 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Lmo2P25801 158 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 E2f2P56931 443 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 PrkacbP68181 351 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Traf6P70196 530 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fmo3P97501 534 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Kcnc2Q14B80 642 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tatdn1Q6P8M1 295 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rrm2bQ6PEE3 351 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Smpd4Q6ZPR5 823 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Q8BHN7 327 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fam131aQ8BWU3 361 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Zswim3Q8CFL8 695 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 PolbQ8K409 335 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Plekhh3Q8VCE9 796 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 DgkgQ91WG7 788 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 GneQ91WG8 722 aaKnown RBP9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fundc1Q9DB70 155 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tssc4Q9JHE7 317 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rgs1Q9JL25 209 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Nt5cQ9JM14 200 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Acox2Q9QXD1 681 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Col22a1E9Q7P1 1613 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mybpc1D3YU50 1127 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Adamts6D3Z1A5 1117 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 4930558K02RikE0CXC6 182 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ptar1E9QAB6 424 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm20695H3BLK7 282 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Angpt1O08538 498 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Dpysl2O08553 572 aaKnown RBP9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Fzd1O70421 642 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 ShdO88834 343 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Bpifa6Q0VGU8 367 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Usp39Q3TIX9 564 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Cd300aQ6SJQ0 318 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Arhgap22Q8BL80 702 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Taf5Q8C092 801 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Map2k7Q8CE90 535 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tas1r2Q925I4 843 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 MlycdQ99J39 492 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Serpinb1aQ9D154 379 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm45233A0A0N4SVE0 221 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm13212B1ASQ7 799 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Vmn2r118E9Q1C1 853 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 PfkmP47857 780 aaKnown RBP9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Impdh1P50096 514 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tsc22d1P62500 1077 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 LvrnQ2KHK3 559 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Slc29a2Q61672 456 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Vwa2Q70UZ7 791 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ptpn7Q8BUM3 359 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 RhoqQ8R527 205 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Asz1Q8VD46 475 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Olfr697Q8VFM4 317 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Olfr1302Q8VGE9 315 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Bbox1Q924Y0 387 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Prps2Q9CS42 318 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 4930402K13RikB1AW18 415 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gm6811E9Q3Y8 510 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ccdc149F6V035 524 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 NapsaO09043 419 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Dnajb5O89114 348 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gabrr2P56476 465 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Timm13P62075 95 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 AnpepP97449 966 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Plpp4Q0VBU9 271 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Tmem164Q6PHN7 296 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ints7Q7TQK1 966 aaKnown RBP9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Klhl42Q8BFQ9 493 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Zbtb33Q8BN78 671 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Svs2Q8BS30 375 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Samd7Q8C8Y5 445 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Acsl5Q8JZR0 683 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Colec12Q8K4Q8 742 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mtif3Q9CZD5 276 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Anks3Q9CZK6 655 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Nrip2Q9JHR9 270 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Asap1Q9QWY8 1147 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Gpc1Q9QZF2 557 aa9.83□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Phrf1A6H619 1682 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Olfr694K7N641 315 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Mtnd3P03899 115 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ncam1P13595 1115 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 DcnP28654 354 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Alox12P39655 663 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Rhox5P52651 210 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Ccdc177Q3UHB8 706 aa9.82□□□□□ -0.84
Ldlr-201ENSMUST00000034713 Pacs2Q3V3Q7 862 aa9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms