RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ankrd61Q9CQM6 421 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Usp12Q9D9M2 370 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Il21Q9ES17 146 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 IkbkeQ9R0T8 717 aa12.63□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm13089A2AGW7 455 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vmn2r50E9PW61 861 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tsc22d2E9Q7M2 769 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gsta1P13745 223 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gria2P23819 883 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gsta1Q6P8Q0 223 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pik3c3Q6PF93 887 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Prox2Q8BII1 593 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Stx16Q8BVI5 326 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Slc44a3Q921V7 656 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Prmt3Q922H1 532 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 PirQ9D711 290 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Alg13Q9D8C3 1166 aaKnown RBP12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 NckipsdQ9ESJ4 714 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Cry2Q9R194 592 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Cdc42ep5Q9Z0X0 150 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 A0A1L1ST33 502 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Zmynd12A2BGJ5 363 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Olfr521E9Q519 321 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gnrh1P13562 90 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 H2-Q8P14430 326 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 PfkmP47857 780 aaKnown RBP12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gbx2P48031 348 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 GuloP58710 440 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 H2-Q6P79568 326 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 F8a1Q00558 380 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 MitfQ08874 526 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Abhd15Q5F2F2 459 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 CcncQ62447 283 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pik3r3Q64143 461 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Svs1Q6WIZ7 820 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Olfr813Q7TRH5 310 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gtf2a2Q80ZM7 109 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Abhd11Q8K4F5 307 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tspan33Q8R3S2 283 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pcolce2Q8R4W6 414 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Olfr273Q8VG87 317 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ubap2Q91VX2 1132 aaKnown RBP12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Srfbp1Q9CZ91 441 aaKnown RBP12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 MsraQ9D6Y7 233 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 GghQ9Z0L8 317 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Zar1lC3VD30 291 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm8369E9PZI3 166 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Kpna4O35343 521 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gna12P27600 379 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tbxas1P36423 533 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Csf3rP40223 837 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Acot8P58137 320 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Arl14Q3SXC5 192 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Eef2kmtQ3UZW7 335 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rasgrp3Q6NZH9 691 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rslcan18Q7M6X5 460 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pik3cbQ8BTI9 1064 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Q8BZE1 841 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rem2Q8VEL9 341 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 GcshQ91WK5 170 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fastkd2Q922E6 689 aaKnown RBP12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Trem2Q99NH8 227 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 MispQ9D279 648 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Armc8Q9DBR3 673 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Dhx34Q9DBV3 1145 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Ak1Q9R0Y5 194 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 KlO35082 1014 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Klf10O89091 479 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Lsp1P19973 330 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pxmp2P42925 194 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pax7P47239 503 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 SykP48025 629 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Psme2P97372 239 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Serpina12Q7TMF5 413 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Slc36a3Q811P0 477 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fbxo30Q8BJL1 746 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Bdh2Q8JZV9 245 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Usp45Q8K387 813 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Themis3Q9CU24 569 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Adgrf4Q9D2L6 698 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tlr6Q9EPW9 795 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Krt81Q9ERE2 481 aa12.62□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm4869A0A1B0GSG7 984 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Tbkbp1A2A9T0 611 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Kif28pD3YXS5 1028 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Gm17555F6U8B9 371 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Vmn2r31L7N1Z4 861 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Fth1P09528 182 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Il12aP43431 215 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Prrg3Q6PAQ9 231 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Plekha6Q7TQG1 1173 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 BspryQ80YW5 473 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Mcfd2Q8K5B2 145 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Msh4Q99MT2 958 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Pard3bQ9CSB4 1203 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Cyp2c55Q9D816 490 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Rpn2Q9DBG6 631 aaKnown RBP12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Kmt2eQ3UG20 1868 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Otud3B1AZ99 396 aa12.61□□□□□ -0.39
Clcn3-201ENSMUST00000004430 Zfp938E9Q9G3 579 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms