RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 MTPNP58546 118 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 ERVPABLB-1P60509 514 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 ERVK-8P63133 956 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 GRIK2Q13002 908 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 DLEU7Q6UYE1 221 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 ZNF598Q86UK7 904 aaKnown RBP13.68□□□□□ -0.22
PHGDH-233ENST00000642021 ITIH5Q86UX2 942 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 RIMKLAQ8IXN7 391 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 BPIFB1Q8TDL5 484 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 LZICQ8WZA0 190 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 FBXO32Q969P5 355 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 UROC1Q96N76 676 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 C1QTNF3Q9BXJ4 246 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 CCDC68Q9H2F9 335 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 ACTL8Q9H568 366 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 IFT80Q9P2H3 777 aaPredicted RBP13.68□□□□□ -0.22
PHGDH-233ENST00000642021 TRPM7Q96QT4 1865 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 IQCF5A8MTL0 148 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 UMPSP11172 480 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 MATN1P21941 496 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 HTR1EP28566 365 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 SPATS1Q496A3 300 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 SFRP1Q8N474 314 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 DTWD1Q8N5C7 304 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 SGCDQ92629 289 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 CCSER2Q9H7U1 834 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 PCDHGA11Q9Y5H2 935 aa13.68□□□□□ -0.22
PHGDH-233ENST00000642021 STX16O14662 325 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 RSL1D1O76021 490 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 SHMT2P34897 504 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 MRPL19P49406 292 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 DGKQP52824 942 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 YBEYP58557 167 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 BNIP3Q12983 259 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 BTG3Q14201 252 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 FXNQ16595 210 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 PDCD4Q53EL6 469 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 CTSL3PQ5NE16 218 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 LETMD1Q6P1Q0 360 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 Q6ZNX1 250 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 GLT6D1Q7Z4J2 308 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 HID1Q8IV36 788 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 TBC1D15Q8TC07 691 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 GFM2Q969S9 779 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 THAP11Q96EK4 314 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 PAIP1Q9H074 479 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 CRISPLD1Q9H336 500 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 BPIFA1Q9NP55 256 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 TSR3Q9UJK0 312 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 TDRD15B5MCY1 1934 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 FAM234BA2RU67 622 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 SYCE1LA8MT33 242 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 IGLV3-27P01718 113 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 ENO2P09104 434 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 ARPP19P56211 112 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 FAM117BQ6P1L5 589 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 GPRIN3Q6ZVF9 776 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 RTN4RL1Q86UN2 441 aaPredicted RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 ZFAND4Q86XD8 727 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 LRRC3Q9BY71 257 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 MUC13Q9H3R2 512 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 CARS2Q9HA77 564 aaKnown RBP13.67□□□□□ -0.22
PHGDH-233ENST00000642021 IL37Q9NZH6 218 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 RIMKLBQ9ULI2 386 aa13.67□□□□□ -0.22
PHGDH-233ENST00000642021 MLYCDO95822 493 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 CHEK2O96017 543 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 G6PDP11413 515 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 TACR2P21452 398 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 SLC6A4P31645 630 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 OR1G1P47890 313 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 HLCSP50747 726 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 IST1P53990 364 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 AASDHQ4L235 1098 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 CCNYL2Q5T2Q4 361 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 FAM86B1Q8N7N1 296 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 PDPRQ8NCN5 879 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 OR56A4Q8NGH8 313 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 ZNF420Q8TAQ5 688 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 MIPOL1Q8TD10 442 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 CD200R1Q8TD46 325 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 LINGO1Q96FE5 620 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 FUBP3Q96I24 572 aaKnown RBP eCLIP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 NSMCE2Q96MF7 247 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 MGME1Q9BQP7 344 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 SPON2Q9BUD6 331 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 CD274Q9NZQ7 290 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 ZIM2Q9NZV7 527 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 FKBPLQ9UIM3 349 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 NEUROG3Q9Y4Z2 214 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 PCDHGC4Q9Y5F7 938 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 SCN10AQ9Y5Y9 1956 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 KANSL1LA0AUZ9 987 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 FAM92AA1XBS5 289 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 ZNF182P17025 639 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-233ENST00000642021 ARSFP54793 590 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 PRKG2Q13237 762 aa13.66□□□□□ -0.22
PHGDH-233ENST00000642021 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms