RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ATL2Q8NHH9 583 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 JPH3Q8WXH2 748 aaPredicted RBP7.34□□□□□ -1.23
PHGDH-225ENST00000641720 SLCO2A1Q92959 643 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 TSACCQ96A04 125 aaPredicted RBP7.34□□□□□ -1.23
PHGDH-225ENST00000641720 TMEM159Q96B96 161 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 EID2BQ96D98 161 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 SLC45A3Q96JT2 553 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 KRT12Q99456 494 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 TBL1YQ9BQ87 522 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 FSD1LQ9BXM9 530 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 STRADBQ9C0K7 418 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 ZNF71Q9NQZ8 489 aaPredicted RBP7.34□□□□□ -1.23
PHGDH-225ENST00000641720 RAB6BQ9NRW1 208 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 SIRPGQ9P1W8 387 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 PAK5Q9P286 719 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 RNF14Q9UBS8 474 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 PCYOX1Q9UHG3 505 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 PHTF1Q9UMS5 762 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 RPL26L1Q9UNX3 145 aaKnown RBP7.34□□□□□ -1.23
PHGDH-225ENST00000641720 COQ6Q9Y2Z9 468 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 B3GALT1Q9Y5Z6 326 aa7.34□□□□□ -1.23
PHGDH-225ENST00000641720 SNRNP200O75643 2136 aaKnown RBP7.34□□□□□ -1.23
PHGDH-225ENST00000641720 IGHV5-10-1A0A0J9YXX1 117 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 C1orf232A0A0U1RR37 186 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 A0A1W2PQ67 120 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 TCRBV7S3A2A0A539 114 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 WIPF3A6NGB9 483 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ENO4A6NNW6 628 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 STMND1H3BQB6 276 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 CCDC188H7C350 402 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 TOR1BO14657 336 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 AURKAO14965 403 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 NKX2-8O15522 239 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 RAD51CO43502 376 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ZNF500O60304 480 aaPredicted RBP7.33□□□□□ -1.24
PHGDH-225ENST00000641720 SEMA7AO75326 666 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 AP2A1O95782 977 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 GAS8O95995 478 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PDGFAP04085 211 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 TUBB4AP04350 444 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 FGF1P05230 155 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 APRTP07741 180 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ELFN1P0C7U0 828 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 CYP2A6P11509 494 aaPredicted RBP7.33□□□□□ -1.24
PHGDH-225ENST00000641720 GLB1P16278 677 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 HLA-DPA1P20036 260 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 FDFT1P37268 417 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PAFAH1B1P43034 410 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 LIG3P49916 1009 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 STC1P52823 247 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 EPHB1P54762 984 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 BASP1P80723 227 aaKnown RBP7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PPARDQ03181 441 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 CKAP4Q07065 602 aaKnown RBP7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ELP6Q0PNE2 266 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 GPS1Q13098 491 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PTK6Q13882 451 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PRPSAP1Q14558 356 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 KCNJ11Q14654 390 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 NFATC4Q14934 902 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PPP1R7Q15435 360 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 SLC1A5Q15758 541 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 WSCD2Q2TBF2 565 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ZNF787Q6DD87 383 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ESRP1Q6NXG1 681 aaKnown RBP7.33□□□□□ -1.24
PHGDH-225ENST00000641720 RANBP10Q6VN20 620 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 LIPIQ6XZB0 460 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 MICALCLQ6ZW33 695 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ZNF534Q76KX8 674 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 TIPARPQ7Z3E1 657 aaKnown RBP7.33□□□□□ -1.24
PHGDH-225ENST00000641720 HSD11B1LQ7Z5J1 315 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PELI3Q8N2H9 469 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 TTC30BQ8N4P2 665 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 KIF18AQ8NI77 898 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 CXorf40AQ8TE69 158 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 GRK7Q8WTQ7 553 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 OR1E3Q8WZA6 343 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 GLMNQ92990 594 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 SCRN2Q96FV2 425 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ABHD17AQ96GS6 310 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 COQ10AQ96MF6 247 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PPP1R2P1Q96PQ5 205 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 LYSMD1Q96S90 227 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 NUDT22Q9BRQ3 303 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ADGRE3Q9BY15 652 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 SYNDIG1Q9H7V2 258 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 LRRC40Q9H9A6 602 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 FGF22Q9HCT0 170 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PILRAQ9UKJ1 303 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 SHOC2Q9UQ13 582 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 PPIL1Q9Y3C6 166 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 ZNF711Q9Y462 761 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 DGKBQ9Y6T7 804 aa7.33□□□□□ -1.24
PHGDH-225ENST00000641720 NIPBLQ6KC79 2804 aaeCLIP7.33□□□□□ -1.24
PHGDH-225ENST00000641720 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.32□□□□□ -1.24
PHGDH-225ENST00000641720 LOC101059948A0A1B0GTJ6 334 aa7.32□□□□□ -1.24
PHGDH-225ENST00000641720 TMEM202A6NGA9 273 aa7.32□□□□□ -1.24
PHGDH-225ENST00000641720 ANKRD66B4E2M5 251 aa7.32□□□□□ -1.24
PHGDH-225ENST00000641720 AGRPO00253 132 aa7.32□□□□□ -1.24
PHGDH-225ENST00000641720 HGSO14964 777 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms