RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 UGT1A4P22310 534 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 UGT1A3P35503 534 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 TGIF1Q15583 401 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 SNAP47Q5SQN1 464 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 WASH2PQ6VEQ5 465 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 TBC1D10AQ9BXI6 508 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 UGT1A7Q9HAW7 530 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 UGT1A10Q9HAW8 530 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 UGT1A8Q9HAW9 530 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 WASH6PQ9NQA3 447 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 SCHIP1Q9P0W5 487 aaPredicted RBP24.81■■□□□ 1.56
VEGFA-232ENST00000640653 PCDHGA3Q9Y5H0 932 aa24.81■■□□□ 1.56
VEGFA-232ENST00000640653 C5orf60A6NFR6 353 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 PRR19A6NJB7 356 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 PDE1BQ01064 536 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 COL9A2Q14055 689 aaPredicted RBP24.8■■□□□ 1.56
VEGFA-232ENST00000640653 GPRC6AQ5T6X5 926 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 AGAP9Q5VTM2 703 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 ABRAXAS1Q6UWZ7 409 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 C11orf96Q7Z7L8 435 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 ZFAND4Q86XD8 727 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 FAM129CQ86XR2 697 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 APOL2Q9BQE5 337 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 POT1Q9NUX5 634 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 SMOXQ9NWM0 555 aa24.8■■□□□ 1.56
VEGFA-232ENST00000640653 IGSF10Q6WRI0 2623 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 EFCAB7A8K855 629 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 B4E171 279 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 GAPDHSO14556 408 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 DDX3YO15523 660 aaKnown RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 GPR39O43194 453 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 PRAMEF1O95521 474 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 CRTAMO95727 393 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 RPL10P27635 214 aaKnown RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 SLC19A1P41440 591 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 TSPAN7P41732 249 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 TAF1BQ53T94 588 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 MANEAQ5SRI9 462 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 TMEM26Q6ZUK4 368 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 AMZ2Q86W34 360 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 PLXDC1Q8IUK5 500 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 RASGEF1AQ8N9B8 481 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 OR4K2Q8NGD2 314 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 ZNF398Q8TD17 642 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 ART4Q93070 314 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 TBL1YQ9BQ87 522 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 DDA1Q9BW61 102 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 SLC39A1Q9NY26 324 aa24.79■■□□□ 1.56
VEGFA-232ENST00000640653 ZNF624Q9P2J8 865 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 FEZ2Q9UHY8 353 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 DNMT3AQ9Y6K1 912 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-232ENST00000640653 A0A0U1RQJ8 604 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 A8MU76 341 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 STMND1H3BQB6 276 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 MSH3P20585 1137 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 AKT1P31749 480 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 HALP42357 657 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 RAB15P59190 212 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 OLIG2Q13516 323 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 PTPRCAPQ14761 206 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 ARHGEF18Q6ZSZ5 1173 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 ARHGAP22Q7Z5H3 698 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 DTX1Q86Y01 620 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 RBM12BQ8IXT5 1001 aaKnown RBP24.78■■□□□ 1.56
VEGFA-232ENST00000640653 RNF10Q8N5U6 811 aaKnown RBP24.78■■□□□ 1.56
VEGFA-232ENST00000640653 CXorf40BQ96DE9 158 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 WBP1Q96G27 269 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 ASPSCR1Q9BZE9 553 aa24.78■■□□□ 1.56
VEGFA-232ENST00000640653 SMG1Q96Q15 3661 aaKnown RBP24.78■■□□□ 1.56
VEGFA-232ENST00000640653 POP7O75817 140 aaKnown RBP24.77■■□□□ 1.56
VEGFA-232ENST00000640653 BRAFP15056 766 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 DRG2P55039 364 aaKnown RBP24.77■■□□□ 1.56
VEGFA-232ENST00000640653 DMPKQ09013 629 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 KLF1Q13351 362 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-232ENST00000640653 LONRF2Q1L5Z9 754 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 DCAF12Q5T6F0 453 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 TMEM220Q6QAJ8 160 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 HES6Q96HZ4 224 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 ZNF514Q96K75 400 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-232ENST00000640653 TSGA10Q9BZW7 698 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 ARNT2Q9HBZ2 717 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 OCIAD1Q9NX40 245 aa24.77■■□□□ 1.56
VEGFA-232ENST00000640653 OR2AG2A6NM03 316 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 SRP72O76094 671 aaKnown RBP24.76■■□□□ 1.55
VEGFA-232ENST00000640653 UBXN7O94888 489 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 AMD1P17707 334 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 CTSCP53634 463 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 PARP6Q2NL67 630 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 KLHDC8BQ8IXV7 354 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 FAM71DQ8N9W8 422 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 C19orf43Q9BQ61 176 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 ASB8Q9H765 288 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 KLHL3Q9UH77 587 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 FKBPLQ9UIM3 349 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 B3GALT1Q9Y5Z6 326 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 CAPN6Q9Y6Q1 641 aa24.76■■□□□ 1.55
VEGFA-232ENST00000640653 MN1Q10571 1320 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-232ENST00000640653 OR52A4PA6NMU1 304 aa24.75■■□□□ 1.55
VEGFA-232ENST00000640653 EFSO43281 561 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms