RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SUV39H1O43463 412 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 PEX2P28328 305 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 ACTR3P61158 418 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 CBX2Q14781 532 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 ZNF513Q8N8E2 541 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TMEM175Q9BSA9 504 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 KIFC1Q9BW19 673 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 CIDEBQ9UHD4 219 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 ENPP3O14638 875 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 MYL12AP19105 171 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 UGT1A6P19224 532 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 UGT1A1P22309 533 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 UGT1A4P22310 534 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 UGT1A3P35503 534 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 UGT1A5P35504 534 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 WASP42768 502 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 PRKCQQ04759 706 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 MRPL28Q13084 256 aaKnown RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 C6orf89Q6UWU4 347 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 EIF3MQ7L2H7 374 aaKnown RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 FERD3LQ96RJ6 166 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3DA0A087WVF3 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3IA0A087WXS9 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3EA0A087X179 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3KA0A087X1G2 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3FA6NER0 549 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3LB9A6J9 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 CACNB4O00305 520 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 PER2O15055 1255 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 MT-ND1P03886 318 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3HP0C7X1 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 MAGEA11P43364 429 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 CAPZA2P47755 286 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3GQ6DHY5 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3CQ6IPX1 549 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 CHSY3Q70JA7 882 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TBC1D3Q8IZP1 549 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 ZNF461Q8TAF7 563 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 SH3RF2Q8TEC5 729 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 TRIB2Q92519 343 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 SLC2A13Q96QE2 648 aa17.39■□□□□ 0.37
SCARB2-223ENST00000640640 PHPT1Q9NRX4 125 aaPredicted RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 SAMD4AQ9UPU9 718 aaKnown RBP17.39■□□□□ 0.37
SCARB2-223ENST00000640640 SLC22A2O15244 555 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 DNTTP04053 509 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 AQP1P29972 269 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 CDC42P60953 191 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 CAP1Q01518 475 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SLC10A2Q12908 348 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 PPIGQ13427 754 aaKnown RBP eCLIP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SLC44A4Q53GD3 710 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SNX20Q7Z614 316 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 CFAP206Q8IYR0 622 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SLC47A1Q96FL8 570 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 TMEM209Q96SK2 561 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 C6orf62Q9GZU0 229 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 ZNF232Q9UNY5 417 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 ELOVL7A1L3X0 281 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 FAM149AA5PLN7 773 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SERINC3Q13530 473 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 LRRC73Q5JTD7 316 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 GET4Q7L5D6 327 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 VPS35Q96QK1 796 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 MUC13Q9H3R2 512 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 NDOR1Q9UHB4 597 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SLC27A6Q9Y2P4 619 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 ANKRD66B4E2M5 251 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 RFPL1O75677 317 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 ASMTP46597 345 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 GPR33Q49SQ1 333 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 RAB6CQ53S08 254 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 C14orf80Q86SX3 495 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 ZNF655Q8N720 491 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 TDRD1Q9BXT4 1180 aaKnown RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 RAB6CQ9H0N0 254 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 DUS2Q9NX74 493 aaKnown RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 DNAJB4Q9UDY4 337 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 ABLIM1O14639 778 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 MYL12BO14950 172 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 HAPLN1P10915 354 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SSR2P43308 183 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 BLVRAP53004 296 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 KRR1Q13601 381 aaKnown RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 PLEKHG4Q58EX7 1191 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 MTERF3Q96E29 417 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 PAAF1Q9BRP4 392 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 SPATA5L1Q9BVQ7 753 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 MCM8Q9UJA3 840 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 IKZF3Q9UKT9 509 aa17.38■□□□□ 0.37
SCARB2-223ENST00000640640 PAIP2BQ9ULR5 123 aaKnown RBP17.38■□□□□ 0.37
SCARB2-223ENST00000640640 CNMDO75829 334 aa17.37■□□□□ 0.37
SCARB2-223ENST00000640640 DGKGP49619 791 aa17.37■□□□□ 0.37
SCARB2-223ENST00000640640 MANFP55145 182 aaKnown RBP17.37■□□□□ 0.37
SCARB2-223ENST00000640640 CYP4F2P78329 520 aa17.37■□□□□ 0.37
SCARB2-223ENST00000640640 GNA13Q14344 377 aa17.37■□□□□ 0.37
SCARB2-223ENST00000640640 DGUOKQ16854 277 aa17.37■□□□□ 0.37
SCARB2-223ENST00000640640 RBM44Q6ZP01 1051 aaKnown RBP17.37■□□□□ 0.37
SCARB2-223ENST00000640640 C2orf73Q8N5S3 287 aaPredicted RBP17.37■□□□□ 0.37
SCARB2-223ENST00000640640 ZNF540Q8NDQ6 660 aa17.37■□□□□ 0.37
SCARB2-223ENST00000640640 PNPT1Q8TCS8 783 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms