RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 RANBP3Q9H6Z4 567 aaPredicted RBP6.11□□□□□ -1.43
NECAP1-222ENST00000640072 C19orf12Q9NSK7 152 aa6.11□□□□□ -1.43
NECAP1-222ENST00000640072 PNPLA3Q9NST1 481 aa6.11□□□□□ -1.43
NECAP1-222ENST00000640072 TMLHEQ9NVH6 421 aa6.11□□□□□ -1.43
NECAP1-222ENST00000640072 GLTPQ9NZD2 209 aa6.11□□□□□ -1.43
NECAP1-222ENST00000640072 RUVBL2Q9Y230 463 aaKnown RBP6.11□□□□□ -1.43
NECAP1-222ENST00000640072 PRELID3BQ9Y3B1 194 aa6.11□□□□□ -1.43
NECAP1-222ENST00000640072 TAF6LQ9Y6J9 622 aa6.11□□□□□ -1.43
NECAP1-222ENST00000640072 TCAPO15273 167 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 EFSO43281 561 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 HSPA12AO43301 675 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 CRCPO75575 148 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 F9P00740 461 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 HMGCRP04035 888 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 CSTBP04080 98 aaKnown RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 CD3GP09693 182 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 OR4E1P0C645 316 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 VEGFAP15692 232 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 ITGA6P23229 1130 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PTX3P26022 381 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TYK2P29597 1187 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 MC4RP32245 332 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 ALDH3B2P48448 385 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 SERPINB10P48595 397 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 HOXA1P49639 335 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 CLCNKAP51800 687 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PMP22Q01453 160 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TGM3Q08188 693 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 MESDQ14696 234 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 GRIN2CQ14957 1233 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PTPRRQ15256 657 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PCBP1Q15365 356 aaKnown RBP eCLIP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 NEDD8Q15843 81 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 SWI5Q1ZZU3 235 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 HSDL1Q3SXM5 330 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 NT5DC1Q5TFE4 455 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 ZNF544Q6NX49 715 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 RSBN1LQ6PCB5 846 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TIPARPQ7Z3E1 657 aaKnown RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 ZC3H7AQ8IWR0 971 aaKnown RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 CCDC105Q8IYK2 499 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 ZDHHC14Q8IZN3 488 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 LIX1Q8N485 282 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TMEM35BQ8NCS4 154 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 ZNF420Q8TAQ5 688 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 RFFLQ8WZ73 363 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 MUL1Q969V5 352 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 S100PBPQ96BU1 408 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 ZNF707Q96C28 371 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 C9orf72Q96LT7 481 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 SMOQ99835 787 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 BOLA2Q9H3K6 86 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 RPF2Q9H7B2 306 aaKnown RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 CPNE5Q9HCH3 593 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TBC1D13Q9NVG8 400 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 HECW2Q9P2P5 1572 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 MYH1P12882 1939 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 KLF18A0A0U1RQI7 1052 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 SH2B2O14492 632 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 LIPFP07098 398 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TMIGD3P0DMS9 266 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 IL1R1P14778 569 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 KLRC1P26715 233 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 FMO4P31512 558 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 MCM7P33993 719 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 CASP3P42574 277 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 GPR4P46093 362 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 SLC1A6P48664 564 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 MEOX2P50222 304 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 NDST2P52849 883 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PSPHP78330 225 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 GAD2Q05329 585 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 C1QBPQ07021 282 aaKnown RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 GK3PQ14409 553 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 INPP5AQ14642 412 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 NFIXQ14938 502 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 FAM187BQ17R55 369 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 FAM214AQ32MH5 1076 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PDSS1Q5T2R2 415 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 BTLAQ7Z6A9 289 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PRPF39Q86UA1 669 aaKnown RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 AACSQ86V21 672 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 IQCHQ86VS3 1027 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 HPS6Q86YV9 775 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 DSELQ8IZU8 1212 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PDIK1LQ8N165 341 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 RASGEF1CQ8N431 466 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 VGLL2Q8N8G2 317 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PSMA8Q8TAA3 256 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 RASGRP4Q8TDF6 673 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 LIPHQ8WWY8 451 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TCEAL3Q969E4 200 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 RFT1Q96AA3 541 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 RHBDF1Q96CC6 855 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 AP2M1Q96CW1 435 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 KCNS3Q9BQ31 491 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 TTYH2Q9BSA4 534 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 MTG1Q9BT17 334 aaPredicted RBP6.1□□□□□ -1.43
NECAP1-222ENST00000640072 PPA2Q9H2U2 334 aa6.1□□□□□ -1.43
NECAP1-222ENST00000640072 DHX33Q9H6R0 707 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms