RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 MAP2K7O14733 419 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
CCDC7-216ENST00000640058 HRH2P25021 359 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 NR2C2P49116 596 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 CTSCP53634 463 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 ADIPOQQ15848 244 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 DUOXA1Q1HG43 343 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 RAB6CQ53S08 254 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 WDR20Q8TBZ3 569 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 TMEM190Q8WZ59 177 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 TBATAQ96M53 351 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 SEPT5Q99719 369 aaPredicted RBP4.41□□□□□ -1.7
CCDC7-216ENST00000640058 TMEM39BQ9GZU3 492 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 RAB6CQ9H0N0 254 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 DNAJB4Q9UDY4 337 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 GTF2A1LQ9UNN4 478 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 FLT1P17948 1338 aa4.41□□□□□ -1.7
CCDC7-216ENST00000640058 NOTCH3Q9UM47 2321 aa4.4□□□□□ -1.7
CCDC7-216ENST00000640058 A0A1B0GVC2 190 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 A6NL46 340 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 NR5A2O00482 541 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 NPHP1O15259 732 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 HCRTR2O43614 444 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 EXTL3O43909 919 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 RTN3O95197 1032 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-216ENST00000640058 ANXA7P20073 488 aaKnown RBP4.4□□□□□ -1.71
CCDC7-216ENST00000640058 EPHA2P29317 976 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 MMP15P51511 669 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 SH2D5Q6ZV89 423 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 PTOV1Q86YD1 416 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 RNF168Q8IYW5 571 aaPredicted RBP4.4□□□□□ -1.71
CCDC7-216ENST00000640058 GCSAMQ8N6F7 178 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 SEMA4DQ92854 862 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 ART5Q96L15 291 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF599Q96NL3 588 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 MRPS28Q9Y2Q9 187 aaKnown RBP4.4□□□□□ -1.71
CCDC7-216ENST00000640058 YIPF1Q9Y548 306 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 MMP24Q9Y5R2 645 aa4.4□□□□□ -1.71
CCDC7-216ENST00000640058 TMEM189-UBE2V1I3L0A0 370 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 PLK4O00444 970 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF500O60304 480 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF217O75362 1048 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF821O75541 412 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-216ENST00000640058 IGLV1-44P01699 117 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 CLEC3BP05452 202 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 IGHV4-38-2P0DP08 117 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 NFKBIAP25963 317 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 HOXA13P31271 388 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-216ENST00000640058 NIPAL4Q0D2K0 466 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 LRMPQ12912 555 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 G3BP1Q13283 466 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCDC7-216ENST00000640058 UBE2V1Q13404 147 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 ZFP69Q49AA0 526 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 SOWAHCQ53LP3 525 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-216ENST00000640058 FFAR4Q5NUL3 377 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 TMEM198Q66K66 360 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 MFSD6Q6ZSS7 791 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 ARHGAP12Q8IWW6 846 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 HJURPQ8NCD3 748 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-216ENST00000640058 DBF4BQ8NFT6 615 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 HCAR2Q8TDS4 363 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 SGCDQ92629 289 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 ELMOD3Q96FG2 381 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 C1orf74Q96LT6 269 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 GFI1Q99684 422 aa4.39□□□□□ -1.71
CCDC7-216ENST00000640058 TMEM184BQ9Y519 407 aaPredicted RBP4.39□□□□□ -1.71
CCDC7-216ENST00000640058 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 C15orf62A8K5M9 175 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 J3QR06 171 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 OGG1O15527 345 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 EIF2S1P05198 315 aaKnown RBP4.38□□□□□ -1.71
CCDC7-216ENST00000640058 MSH2P43246 934 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 TFAP4Q01664 338 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 TMEM187Q14656 261 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 ZSCAN23Q3MJ62 389 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 ACSM2BQ68CK6 577 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 GLDNQ6ZMI3 551 aaPredicted RBP4.38□□□□□ -1.71
CCDC7-216ENST00000640058 ZNF843Q8N446 348 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 GAD1Q99259 594 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 ASCL2Q99929 193 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 RCC2Q9P258 522 aaKnown RBP4.38□□□□□ -1.71
CCDC7-216ENST00000640058 KCNJ14Q9UNX9 436 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 STK36Q9NRP7 1315 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 KIAA1210Q9ULL0 1709 aa4.38□□□□□ -1.71
CCDC7-216ENST00000640058 ARHGEF40Q8TER5 1519 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 OR2M5A3KFT3 312 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 MAGEB17A8MXT2 336 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 PSMD14O00487 310 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 SMAD9O15198 467 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 SLC22A2O15244 555 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 DAB1O75553 588 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 GCNT3O95395 438 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 HSPA1AP0DMV8 641 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 HSPA1BP0DMV9 641 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 CKMT2P17540 419 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 CLK1P49759 484 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 MVPQ14764 893 aaKnown RBP4.37□□□□□ -1.71
CCDC7-216ENST00000640058 MEP1AQ16819 746 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 KIAA1644Q3SXP7 199 aa4.37□□□□□ -1.71
CCDC7-216ENST00000640058 TSPAN33Q86UF1 283 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms