RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ACSM1Q08AH1 577 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 MVPQ14764 893 aaKnown RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 EIF2S3LQ2VIR3 472 aaKnown RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 MYLK3Q32MK0 819 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 KRTCAP3Q53RY4 240 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 SLC16A12Q6ZSM3 486 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 DZIP1Q86YF9 867 aaKnown RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 GPSM1Q86YR5 675 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 RASGEF1CQ8N431 466 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 EMC1Q8N766 993 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 GPT2Q8TD30 523 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 HASPINQ8TF76 798 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 DNAAF4Q8WXU2 420 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 SPSB1Q96BD6 273 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 LRRC3BQ96PB8 259 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 INTS14Q96SY0 518 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 MMTAG2Q9BU76 263 aaKnown RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 SIRT3Q9NTG7 399 aaPredicted RBP6.3□□□□□ -1.4
RFC1-217ENST00000639695 CACNG4Q9UBN1 327 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 ODF2LQ9ULJ1 636 aa6.3□□□□□ -1.4
RFC1-217ENST00000639695 OOEPA6NGQ2 149 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 LINC01548A6NM66 108 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 A6NNC1 897 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 WNT9BO14905 357 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 MDM4O15151 490 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 CLIC2O15247 247 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 ZBTB43O43298 467 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 PLPP2O43688 288 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 SSX4O60224 188 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 CREG1O75629 220 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 PNPP00491 289 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 SNRNP70P08621 437 aaKnown RBP6.29□□□□□ -1.4
RFC1-217ENST00000639695 SOAT1P35610 550 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 SNRPEP62304 92 aaKnown RBP6.29□□□□□ -1.4
RFC1-217ENST00000639695 MZT1Q08AG7 82 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 NR1D2Q14995 579 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 FRG2Q64ET8 278 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 FAM91A1Q658Y4 838 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 TATDN1Q6P1N9 297 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 DUS1LQ6P1R4 473 aaKnown RBP6.29□□□□□ -1.4
RFC1-217ENST00000639695 ZNF449Q6P9G9 518 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 FAM198BQ6UWH4 519 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 B3GNT6Q6ZMB0 384 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 FAM43BQ6ZT52 329 aaPredicted RBP6.29□□□□□ -1.4
RFC1-217ENST00000639695 TBC1D16Q8TBP0 767 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 WDR20Q8TBZ3 569 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 SLAMF9Q96A28 289 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 ORAI1Q96D31 301 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 KXD1Q9BQD3 176 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 POLDIP3Q9BY77 421 aaKnown RBP6.29□□□□□ -1.4
RFC1-217ENST00000639695 WNT5BQ9H1J7 359 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 MAP6D1Q9H9H5 199 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 MID1IP1Q9NPA3 183 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 NRIP3Q9NQ35 241 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 CNGB3Q9NQW8 809 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 PDGFCQ9NRA1 345 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 PRMT7Q9NVM4 692 aaPredicted RBP6.29□□□□□ -1.4
RFC1-217ENST00000639695 ERAP1Q9NZ08 941 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 MSRB1Q9NZV6 116 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 SQORQ9Y6N5 450 aa6.29□□□□□ -1.4
RFC1-217ENST00000639695 WIPF3A6NGB9 483 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 TLX3O43711 291 aaPredicted RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 ITM2AO43736 263 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 MOCS3O95396 460 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 IFNA2P01563 188 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 CERS1P27544 350 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 HNRNPH1P31943 449 aaKnown RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 STX2P32856 288 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 STX1BP61266 288 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 CDK3Q00526 305 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 PPATQ06203 517 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 ACTN3Q08043 901 aaPredicted RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 SLC10A2Q12908 348 aaPredicted RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 MELKQ14680 651 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 DUSP6Q16828 381 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 PPP6R3Q5H9R7 873 aaPredicted RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 Q5PR19 223 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 SHEQ5VZ18 495 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 KCTD18Q6PI47 426 aaPredicted RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 CNSTQ6PJW8 725 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 DEF8Q6ZN54 512 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 GBP6Q6ZN66 633 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 ABI3BPQ7Z7G0 1075 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 ANKRD13BQ86YJ7 626 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 ZNF595Q8IYB9 648 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 TRIML1Q8N9V2 468 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 NHLRC2Q8NBF2 726 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 C9orf43Q8TAL5 461 aaPredicted RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 SCARB1Q8WTV0 552 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 RSPH1Q8WYR4 309 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 PARK7Q99497 189 aaKnown RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 INPP5KQ9BT40 448 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 UTP14AQ9BVJ6 771 aaKnown RBP6.28□□□□□ -1.4
RFC1-217ENST00000639695 KCNN2Q9H2S1 579 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 MMP25Q9NPA2 562 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 DPP3Q9NY33 737 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 VPS18Q9P253 973 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 CDC14AQ9UNH5 594 aa6.28□□□□□ -1.4
RFC1-217ENST00000639695 SLC33A1O00400 549 aaPredicted RBP6.27□□□□□ -1.41
RFC1-217ENST00000639695 KCNN4O15554 427 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms