RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TIMM29Q9BSF4 260 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 PCYOX1Q9UHG3 505 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 PCDHB1Q9Y5F3 818 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 NTN3O00634 580 aaPredicted RBP21.43■■□□□ 1.02
SCN1B-206ENST00000638536 B4GAT1O43505 415 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 GOT2P00505 430 aaKnown RBP21.43■■□□□ 1.02
SCN1B-206ENST00000638536 BRAFP15056 766 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 ACRV1P26436 265 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 NMBRP28336 390 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 CLCNKAP51800 687 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 DRG2P55039 364 aaKnown RBP21.43■■□□□ 1.02
SCN1B-206ENST00000638536 OR1D5P58170 312 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 CDK16Q00536 496 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 ACVR1Q04771 509 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 CACNG1Q06432 222 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 DBN1Q16643 649 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 GPR33Q49SQ1 333 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 CES3Q6UWW8 571 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 GRK7Q8WTQ7 553 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 TRIM56Q9BRZ2 755 aaKnown RBP21.43■■□□□ 1.02
SCN1B-206ENST00000638536 SYNDIG1Q9H7V2 258 aa21.43■■□□□ 1.02
SCN1B-206ENST00000638536 ATXN7L1Q9ULK2 861 aaPredicted RBP21.43■■□□□ 1.02
SCN1B-206ENST00000638536 USP24Q9UPU5 2620 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 RPLP0P05388 317 aaKnown RBP21.42■■□□□ 1.02
SCN1B-206ENST00000638536 PBLDP30039 288 aaPredicted RBP21.42■■□□□ 1.02
SCN1B-206ENST00000638536 NPY2RP49146 381 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 PDX1P52945 283 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 NFE2L1Q14494 772 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 TMPRSS9Q7Z410 1059 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 SPRED1Q7Z699 444 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 AGGF1Q8N302 714 aaeCLIP21.42■■□□□ 1.02
SCN1B-206ENST00000638536 CLDN19Q8N6F1 224 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 NAT8LQ8N9F0 302 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 PPHLN1Q8NEY8 458 aaKnown RBP21.42■■□□□ 1.02
SCN1B-206ENST00000638536 ULK4Q96C45 1275 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 COPS8Q99627 209 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 ZCCHC2Q9C0B9 1178 aaKnown RBP21.42■■□□□ 1.02
SCN1B-206ENST00000638536 ZDHHC3Q9NYG2 299 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 RIMKLBQ9ULI2 386 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 WDR37Q9Y2I8 494 aa21.42■■□□□ 1.02
SCN1B-206ENST00000638536 IGLV3-16A0A075B6K0 115 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 PRAMEF33A0A0G2JMD5 474 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 F3P13726 295 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 CASQ1P31415 396 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 SEMA3AQ14563 771 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 PPP1R7Q15435 360 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 ZNF438Q7Z4V0 828 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 CCNJLQ8IV13 435 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 LILRA3Q8N6C8 439 aaPredicted RBP21.41■■□□□ 1.02
SCN1B-206ENST00000638536 OR6C4Q8NGE1 309 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 SLCO2A1Q92959 643 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 IL22Q9GZX6 179 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 LRRN3Q9H3W5 708 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 TREX1Q9NSU2 369 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 BFARQ9NZS9 450 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 PRSS21Q9Y6M0 314 aa21.41■■□□□ 1.02
SCN1B-206ENST00000638536 TRABD2BA6NFA1 517 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 PNLIPP16233 465 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 IVDP26440 423 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 ALDH4A1P30038 563 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 MRPS25P82663 173 aaKnown RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 PTK6Q13882 451 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 UNQ6494/PRO21346Q6UXR6 183 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 AMZ2Q86W34 360 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 MFSD3Q96ES6 412 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 ZNF624Q9P2J8 865 aaPredicted RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 FAM8A1Q9UBU6 413 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 ANKRD11Q6UB99 2663 aaPredicted RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 RHPN2P1A8MT19 583 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 CSO75390 466 aaKnown RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 ATP1B2P14415 290 aaPredicted RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 FASLGP48023 281 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 NR1D2Q14995 579 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 CLCA4Q14CN2 919 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 ISXQ2M1V0 245 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 RNASEH2BQ5TBB1 312 aaKnown RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 B3GNT8Q7Z7M8 397 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 LDB1Q86U70 411 aaPredicted RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 OR6P1Q8NGX9 317 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 DCUN1D1Q96GG9 259 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 SERPINB12Q96P63 405 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 KIFC1Q9BW19 673 aa21.4■■□□□ 1.02
SCN1B-206ENST00000638536 MARCH4Q9P2E8 410 aaPredicted RBP21.4■■□□□ 1.02
SCN1B-206ENST00000638536 A0A1W2PNU3 283 aaPredicted RBP21.39■■□□□ 1.01
SCN1B-206ENST00000638536 OR52A4PA6NMU1 304 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 PDZK1P1A8MUH7 402 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 OR1I1O60431 355 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 CAPNS1P04632 268 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 ARNTP27540 789 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 SLC19A1P41440 591 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 PAFAH1B1P43034 410 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 DMPKQ09013 629 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 AMZ1Q400G9 498 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 BCL7AQ4VC05 210 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 NKAIN2Q5VXU1 208 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 ABRAXAS1Q6UWZ7 409 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 NLRP9Q7RTR0 991 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 CACTIN-AS1Q8N1I8 211 aa21.39■■□□□ 1.01
SCN1B-206ENST00000638536 MCUQ8NE86 351 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms