RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CD9P21926 228 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 PSMA3P25788 255 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 GRK4P32298 578 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 THPOP40225 353 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 ALDH3A2P51648 485 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 ARSFP54793 590 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 TAF1AQ15573 450 aaPredicted RBP19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 NEDD8Q15843 81 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 TBPL2Q6SJ96 375 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 GLT6D1Q7Z4J2 308 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 PAIP1Q9H074 479 aaKnown RBP19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 HEBP1Q9NRV9 189 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 GALPQ9UBC7 116 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 PCDHGA11Q9Y5H2 935 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 TMX2-CTNND1H3BSU7 103 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 INPPL1O15357 1258 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 TSPAN12O95859 305 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 JUNBP17275 347 aaPredicted RBP19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 FGD3Q5JSP0 725 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 C10orf120Q5SQS8 335 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 SLC2A7Q6PXP3 512 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 SFRP1Q8N474 314 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 PDPRQ8NCN5 879 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 OR13F1Q8NGS4 319 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 FBXO32Q969P5 355 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 NTN4Q9HB63 628 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 TRMT6Q9UJA5 497 aaKnown RBP19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZNF711Q9Y462 761 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 V9GYQ6 96 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 SLC12A8A0AV02 714 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 E2F3O00716 465 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 IGHA2P01877 340 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 HMBSP08397 361 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 PKMP14618 531 aaKnown RBP19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 PORP16435 677 aaPredicted RBP19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 MAGEA11P43364 429 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 TMBIM6P55061 237 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 RING1Q06587 406 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 CBX2Q14781 532 aaPredicted RBP19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 GPSM1Q86YR5 675 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 SEPT3Q9UH03 358 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 PCDHB5Q9Y5E4 795 aa19.89■□□□□ 0.77
SYNGAP1-227ENST00000638142 C2orf81A6NN90 581 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 H0Y858 1186 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 ARNTLO00327 626 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 PFDN6O15212 129 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 COQ9O75208 318 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 OR4F21O95013 312 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 RAP2AP10114 183 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 YAP1P46937 504 aaKnown RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 FKBP1BP68106 108 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 DAG1Q14118 895 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 OTUD3Q5T2D3 398 aaPredicted RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 DLEU7Q6UYE1 221 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 RNF168Q8IYW5 571 aaPredicted RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 CDYL2Q8N8U2 506 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 MUS81Q96NY9 551 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 NAA50Q9GZZ1 169 aaKnown RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 TLR9Q9NR96 1032 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 CD274Q9NZQ7 290 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 EIF2B4Q9UI10 523 aaKnown RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 UPK1AO00322 258 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 IFRD1O00458 451 aaPredicted RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 MBL2P11226 248 aaPredicted RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 HK3P52790 923 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 C21orf59P57076 290 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 IL2P60568 153 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 MTA1Q13330 715 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 TMEM214Q6NUQ4 689 aaKnown RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 Q6ZSR9 355 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 ZNF598Q86UK7 904 aaKnown RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 AADATQ8N5Z0 425 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 RMDN1Q96DB5 314 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 MYEOVQ96EZ4 313 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 PLEKHA8Q96JA3 519 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 PIF1Q9H611 641 aa19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 TLR8Q9NR97 1041 aaKnown RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 ARIH1Q9Y4X5 557 aaPredicted RBP19.88■□□□□ 0.77
SYNGAP1-227ENST00000638142 BOLA2-SMG1P6H3BVE0 249 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 ANXA6P08133 673 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 TACR2P21452 398 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 HOXD9P28356 352 aaPredicted RBP19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 TTPAP49638 278 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 TUBA3CQ13748 450 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 FAM98BQ52LJ0 330 aaKnown RBP19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 BROXQ5VW32 411 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 CHST15Q7LFX5 561 aaPredicted RBP19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 CPNE9Q8IYJ1 553 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 DTWD1Q8N5C7 304 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 PSKH2Q96QS6 385 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 PALMDQ9NP74 551 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 FOXD2O60548 495 aaPredicted RBP19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 HPRP00739 348 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 ALPLP05186 524 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 THRBP10828 461 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 CCNA2P20248 432 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 MOGQ16653 247 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 NADSYN1Q6IA69 706 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 RALGPS2Q86X27 583 aaPredicted RBP19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 SIDT2Q8NBJ9 832 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms