RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	LRRC8C	Q8TDW0	803 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	ZNF75CP	Q92670	426 aa	Predicted RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	FAM136A	Q96C01	138 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	FOXQ1	Q9C009	403 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	DERL2	Q9GZP9	239 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	BTBD1	Q9H0C5	482 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	MRPL46	Q9H2W6	279 aa	Known RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	MANSC1	Q9H8J5	431 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	TBC1D17	Q9HA65	648 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	TRIM39	Q9HCM9	518 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	SARS2	Q9NP81	518 aa	Known RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	USP36	Q9P275	1121 aa	Known RBP	11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	EBF1	Q9UH73	591 aa		11.62	□□□□□ -0.55
CLN6-223	ENST00000637823	WDR91	A4D1P6	747 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	PRR23A	A6NEV1	266 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TARM1	B6A8C7	271 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823		G3V2L1	256 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	INPP4B	O15327	924 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	VEGFD	O43915	354 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	PAK4	O96013	591 aa	Predicted RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	FTH1	P02794	183 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	CBSL	P0DN79	551 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	MYL2	P10916	166 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	CD1D	P15813	335 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TFEB	P19484	476 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TAC1	P20366	129 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	DGKA	P23743	735 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	AOAH	P28039	575 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	OXTR	P30559	389 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	ALDH3A1	P30838	453 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	CBS	P35520	551 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	RPS9	P46781	194 aa	Known RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	GLRB	P48167	497 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	RGS4	P49798	205 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	PRKAA2	P54646	552 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	IRX4	P78413	519 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	FGL2	Q14314	439 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	GAS6	Q14393	721 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TERF2	Q15554	542 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TTLL9	Q3SXZ7	439 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	KHDC1	Q4VXA5	237 aa	Known RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TECRL	Q5HYJ1	363 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	ZYG11A	Q6WRX3	759 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	ISCA2	Q86U28	154 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TRIM69	Q86WT6	500 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	GJD3	Q8N144	294 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	PELI3	Q8N2H9	469 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	SPATA6L	Q8N4H0	392 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	SPEM1	Q8N4L4	309 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	ZBTB2	Q8N680	514 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	RASGEF1A	Q8N9B8	481 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	PLA2G15	Q8NCC3	412 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TSTD1	Q8NFU3	115 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	RHEBL1	Q8TAI7	183 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	EEF1AKMT1	Q8WVE0	214 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	SREK1	Q8WXA9	508 aa	Known RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	SGF29	Q96ES7	293 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	CHMP6	Q96FZ7	201 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	COX14	Q96I36	57 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	LENG8	Q96PV6	779 aa	Predicted RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	SLC30A3	Q99726	388 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	CHRD	Q9H2X0	955 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TFB2M	Q9H5Q4	396 aa	Known RBP	11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	SIRPG	Q9P1W8	387 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	COPG2	Q9UBF2	871 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	TRIO	O75962	3097 aa		11.61	□□□□□ -0.55
CLN6-223	ENST00000637823	CEP192	Q8TEP8	1941 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	PLXND1	Q9Y4D7	1925 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	TCP11X1	B4DZS4	312 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	EIF3F	O00303	357 aa	Predicted RBP	11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	KLF11	O14901	512 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	SGTA	O43765	313 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ZBTB14	O43829	449 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	CDK14	O94921	469 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	VIM	P08670	466 aa	Known RBP	11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	SBK3	P0C264	359 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ITGB6	P18564	788 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ACSL1	P33121	698 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	TRIM23	P36406	574 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	SEC24C	P53992	1094 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ZXDA	P98168	799 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ASPH	Q12797	758 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	PCLAF	Q15004	111 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	IRF4	Q15306	451 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	PLEKHS1	Q5SXH7	462 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ZNF648	Q5T619	568 aa	Predicted RBP	11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ATG16L1	Q676U5	607 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	TMEM220	Q6QAJ8	160 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	DET1	Q7L5Y6	550 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	OTOA	Q7RTW8	1153 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	ADGRG6	Q86SQ4	1221 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	C10orf107	Q8IVU9	208 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	PJA1	Q8NG27	643 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	GIMAP7	Q8NHV1	300 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	STAG3L4	Q8TBR4	150 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	LKAAEAR1	Q8TD35	194 aa		11.6	□□□□□ -0.55
CLN6-223	ENST00000637823	KLK6	Q92876	244 aa		11.6	□□□□□ -0.55

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