RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 KMT5CQ86Y97 462 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 RASGRP3Q8IV61 690 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 TRIM48Q8IWZ4 208 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 TEX19Q8NA77 164 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 CT55Q8WUE5 264 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 STAMBPL1Q96FJ0 436 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 GPR87Q9BY21 358 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 SHOC2Q9UQ13 582 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 WDR37Q9Y2I8 494 aa16.12■□□□□ 0.17
CLN3-255ENST00000637100 PCDHGA9Q9Y5G4 932 aaKnown RBP16.12■□□□□ 0.17
CLN3-255ENST00000637100 DNMT3AQ9Y6K1 912 aaPredicted RBP16.12■□□□□ 0.17
CLN3-255ENST00000637100 IGHV5-51A0A0C4DH38 117 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 OR52A4PA6NMU1 304 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 NDST3O95803 873 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 SSR1P43307 286 aaKnown RBP16.11■□□□□ 0.17
CLN3-255ENST00000637100 UGT8Q16880 541 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 ASTE1Q2TB18 679 aaPredicted RBP16.11■□□□□ 0.17
CLN3-255ENST00000637100 ATP13A5Q4VNC0 1218 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 ALS2CLQ60I27 953 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 CRTC3Q6UUV7 619 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 TMEM135Q86UB9 458 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 ATCAYQ86WG3 371 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 GALNT11Q8NCW6 608 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 BRSK1Q8TDC3 778 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 GPR63Q9BZJ6 419 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 AKIRIN1Q9H9L7 192 aaPredicted RBP16.11■□□□□ 0.17
CLN3-255ENST00000637100 PDE7BQ9NP56 450 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 SPO11Q9Y5K1 396 aa16.11■□□□□ 0.17
CLN3-255ENST00000637100 LOC285095A0A1B0GVY8 99 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 PDZK1P1A8MUH7 402 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 GOLGA6L22H0YM25 854 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 AURKAO14965 403 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 EPOP01588 193 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 H2AFZP0C0S5 128 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 PIRTP0C851 137 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 FOLR1P15328 257 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 RPL10P27635 214 aaKnown RBP16.1■□□□□ 0.17
CLN3-255ENST00000637100 MLLT10P55197 1068 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 PDK1Q15118 436 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 TEX44Q53QW1 395 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 CAPRIN2Q6IMN6 1127 aaKnown RBP16.1■□□□□ 0.17
CLN3-255ENST00000637100 PWWP2BQ6NUJ5 590 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 H2AFVQ71UI9 128 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 D2HGDHQ8N465 521 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 TTC30BQ8N4P2 665 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 ZFPM2Q8WW38 1151 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 THAP4Q8WY91 577 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 ZNF830Q96NB3 372 aaPredicted RBP16.1■□□□□ 0.17
CLN3-255ENST00000637100 CD180Q99467 661 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 TRIM55Q9BYV6 548 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 TWSG1Q9GZX9 223 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 TRABDQ9H4I3 376 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 GLOD4Q9HC38 313 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 IL26Q9NPH9 171 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 CTTNBP2NLQ9P2B4 639 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 LNPEPQ9UIQ6 1025 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 DNAJC16Q9Y2G8 782 aa16.1■□□□□ 0.17
CLN3-255ENST00000637100 SPTBN1Q01082 2364 aaKnown RBP16.1■□□□□ 0.17
CLN3-255ENST00000637100 PIPSLA2A3N6 862 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 BLACEA4D250 179 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 CDC14CA4D256 554 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 MTX2O75431 263 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 KATNA1O75449 491 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 CEACAM4O75871 244 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 RASSF9O75901 435 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 SERPINC1P01008 464 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 GYPCP04921 128 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 VCLP18206 1134 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 PTPN4P29074 926 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 DRG2P55039 364 aaKnown RBP16.09■□□□□ 0.17
CLN3-255ENST00000637100 PPP1CAP62136 330 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 FANCCQ00597 558 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 PLA2G4EQ3MJ16 856 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 LRRC38Q5VT99 294 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 FAM92BQ6ZTR7 304 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 SYVN1Q86TM6 617 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 CARFQ8N187 725 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 SPATA22Q8NHS9 363 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 CXorf40BQ96DE9 158 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 TEKT5Q96M29 485 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 ACTL8Q9H568 366 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 CBX8Q9HC52 389 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 LATS2Q9NRM7 1088 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLN3-255ENST00000637100 IL17CQ9P0M4 197 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 RARRES3Q9UL19 164 aa16.09■□□□□ 0.17
CLN3-255ENST00000637100 LUC7L2Q9Y383 392 aaKnown RBP16.09■□□□□ 0.17
CLN3-255ENST00000637100 SORBS2O94875 1100 aaKnown RBP16.08■□□□□ 0.16
CLN3-255ENST00000637100 MT-CYBP00156 380 aaPredicted RBP16.08■□□□□ 0.16
CLN3-255ENST00000637100 LPOP22079 712 aaPredicted RBP16.08■□□□□ 0.16
CLN3-255ENST00000637100 GJC1P36383 396 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 ACY1Q03154 408 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 TUBB3Q13509 450 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 SEPT7Q16181 437 aaKnown RBP16.08■□□□□ 0.16
CLN3-255ENST00000637100 RPE65Q16518 533 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 SLC18A3Q16572 532 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 TAZQ16635 292 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 ZDHHC20Q5W0Z9 365 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 METRNLQ641Q3 311 aa16.08■□□□□ 0.16
CLN3-255ENST00000637100 IRGCQ6NXR0 463 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms