RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PARD6BQ9BYG5 372 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ACSS3Q9H6R3 686 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ASB8Q9H765 288 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ERVMER34-1Q9H9K5 563 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 LRRC4CQ9HCJ2 640 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 TRIM39Q9HCM9 518 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ZDHHC3Q9NYG2 299 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 TXNDC16Q9P2K2 825 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 KLHL42Q9P2K6 505 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CRLS1Q9UJA2 301 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 ZNF180Q9UJW8 692 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 PILRBQ9UKJ0 227 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 GPR34Q9UPC5 381 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 SLC17A4Q9Y2C5 497 aa6.65□□□□□ -1.34
UPF3B-205ENST00000636792 CACNA1HO95180 2353 aa6.65□□□□□ -1.35
UPF3B-205ENST00000636792 COL5A1P20908 1838 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 VCANP13611 3396 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SPTY2D1-AS1A0A0U1RR47 76 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 C17orf113A0A1B0GUU1 675 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 A0A1W2PR77 199 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TCRBV9S1A1TA0A576 114 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 CCDC189A1A4V9 331 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 CCDC162PA2VCL2 907 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 PRR23AA6NEV1 266 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 FAM159BA6NKW6 160 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 FADS2P1A8MWK0 482 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 DLL1O00548 723 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 PRMT5O14744 637 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 CHUKO15111 745 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 BCAT2O15382 392 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SLC31A1O15431 190 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 CD3EAPO15446 510 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 RIPK2O43353 540 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TCEA3O75764 348 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SLC25A14O95258 325 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 RASGRP1O95267 797 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SLC4A1P02730 911 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 FTH1P02794 183 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 PCCBP05166 539 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 RETP07949 1114 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 H2AFB1P0C5Y9 115 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 H2AFB2P0C5Z0 115 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 VCLP18206 1134 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 PMLP29590 882 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 GP5P40197 560 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 LEPRP48357 1165 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 DHPSP49366 369 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 PRLHRP49683 370 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SERPINB9P50453 376 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 ARSDP51689 593 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 CLCNKAP51800 687 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 CRADDP78560 199 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 MRPS25P82663 173 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TCF15Q12870 199 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 DNAJC3Q13217 504 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 INPP5AQ14642 412 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 FASTKD3Q14CZ7 662 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TRADDQ15628 312 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 BCL7AQ4VC05 210 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 ATP13A5Q4VNC0 1218 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 ZRANB3Q5FWF4 1079 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 DENND2CQ68D51 928 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF470Q6ECI4 717 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 UGT3A1Q6NUS8 523 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 NEPROQ6NW34 567 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 FAM151BQ6UXP7 276 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 C3orf62Q6ZUJ4 267 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 RGL4Q8IZJ4 473 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 AVL9Q8NBF6 648 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 C2CD4AQ8NCU7 369 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 OR56A4Q8NGH8 313 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 OR6P1Q8NGX9 317 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SNX19Q92543 992 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 KCNJ9Q92806 393 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SCAMP4Q969E2 229 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 DCUN1D1Q96GG9 259 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF778Q96MU6 729 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 WDR92Q96MX6 357 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TIMM29Q9BSF4 260 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 CCDC68Q9H2F9 335 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 PLAC1Q9HBJ0 212 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 POPDC3Q9HBV1 291 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TM9SF3Q9HD45 589 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 AASDHPPTQ9NRN7 309 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 C20orf96Q9NUD7 363 aaPredicted RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 PIH1D1Q9NWS0 290 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TRNAU1APQ9NX07 287 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 NINJ2Q9NZG7 142 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 EIF2B4Q9UI10 523 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 GNPTGQ9UJJ9 305 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 GMEB2Q9UKD1 530 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 SMG5Q9UPR3 1016 aaKnown RBP6.64□□□□□ -1.35
UPF3B-205ENST00000636792 COQ6Q9Y2Z9 468 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 DGKBQ9Y6T7 804 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TRIOO75962 3097 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 TMEM131Q92545 1883 aa6.64□□□□□ -1.35
UPF3B-205ENST00000636792 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 PRSS38A1L453 326 aa6.63□□□□□ -1.35
UPF3B-205ENST00000636792 A8MX80 341 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms