RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 NDST3O95803 873 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 GSNP06396 782 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 FGF4P08620 206 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 CCND3P30281 292 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 RFC2P35250 354 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 HSPA7P48741 367 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 TPD52P55327 224 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 MGAT3Q09327 533 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SLC36A3Q495N2 470 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 GTDC1Q4AE62 458 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 MBOAT1Q6ZNC8 495 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 Q6ZSR9 355 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 GPRIN3Q6ZVF9 776 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 AQP12AQ8IXF9 295 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SFRP1Q8N474 314 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 DTWD1Q8N5C7 304 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 PPP1R2P1Q96PQ5 205 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 DGCR6LQ9BY27 220 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 TFB2MQ9H5Q4 396 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 NSUN3Q9H649 340 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SYTL2Q9HCH5 934 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 DNAAF2Q9NVR5 837 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 FAM8A1Q9UBU6 413 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 DGKBQ9Y6T7 804 aa13.88□□□□□ -0.19
CACNA1A-228ENST00000636610 USP34Q70CQ2 3546 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 BBIP1A8MTZ0 92 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 UPK3BL1B0FP48 263 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 UPK3BL2E5RIL1 263 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 PTGES3LE9PB15 166 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 H0Y626 953 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 BOLA2-SMG1P6H3BVE0 249 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 STX7O15400 261 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 DFNA5O60443 496 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ZNF623O75123 536 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 TRIM16O95361 564 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 HSD17B1P14061 328 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 SLC2A4P14672 509 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 GNA12Q03113 381 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ATP1A4Q13733 1029 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 LCN8Q6JVE9 175 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ENPP6Q6UWR7 440 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 LYSMD3Q7Z3D4 306 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 TMEM173Q86WV6 379 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 LRRC49Q8IUZ0 686 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 PHACTR4Q8IZ21 702 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 NSMCE2Q96MF7 247 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ZIC5Q96T25 663 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 FANCEQ9HB96 536 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 SLC52A3Q9NQ40 469 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 PCDHB9Q9Y5E1 797 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 H3BMQ9 156 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ZFP36L2P47974 494 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 CCR3P51677 355 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 RPL38P63173 70 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 RCAN2Q14206 197 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ABRAXAS2Q15018 415 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 TRIP4Q15650 581 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ATP6AP1Q15904 470 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ADRM1Q16186 407 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 CST9Q5W186 159 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ABRAXAS1Q6UWZ7 409 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 FAM151BQ6UXP7 276 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 TAS1R1Q7RTX1 841 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 GPR180Q86V85 440 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 TEX26Q8N6G2 289 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 OR10A6Q8NH74 314 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 SEPT8Q92599 483 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 WBP2Q969T9 261 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 FEM1CQ96JP0 617 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 COG8Q96MW5 612 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 ZNF599Q96NL3 588 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 BOCQ9BWV1 1114 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 CARS2Q9HA77 564 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 RRAGCQ9HB90 399 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 TLR8Q9NR97 1041 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 AIG1Q9NVV5 245 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 IFT80Q9P2H3 777 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 UBA2Q9UBT2 640 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 WARS2Q9UGM6 360 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 PCDHB8Q9UN66 801 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 RAI2Q9Y5P3 530 aa13.87□□□□□ -0.19
CACNA1A-228ENST00000636610 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 C2orf81A6NN90 581 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 ESRRBO95718 433 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 PRLP01236 227 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 ALBP02768 609 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 PKMP14618 531 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 SHMT2P34897 504 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 CA5AP35218 305 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 OXCT1P55809 520 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 SH3BGRP55822 239 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 IL2P60568 153 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 NAA20P61599 178 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 NFKB2Q00653 900 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 TGFBIQ15582 683 aa13.86□□□□□ -0.19
CACNA1A-228ENST00000636610 AP5B1Q2VPB7 878 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms