RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 PCDHGA1Q9Y5H4 931 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 A0A087X0B3 334 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GMFGO60234 142 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 APODP05090 189 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 YES1P07947 543 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GLDCP23378 1020 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ATP5C1P36542 298 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PSPHP78330 225 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NR1I3Q14994 352 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NAB2Q15742 525 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ASTE1Q2TB18 679 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PDSS2Q86YH6 399 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GDPD5Q8WTR4 605 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 KCNN1Q92952 543 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RAB39BQ96DA2 213 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TMEM121Q9BTD3 319 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 UCK2Q9BZX2 261 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 STRADBQ9C0K7 418 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RABL2AQ9UBK7 228 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RABL2BQ9UNT1 228 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NEDD4P46934 1319 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ABCC2Q92887 1545 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PNMA6EA0A0J9YXQ4 647 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ARGFXA6NJG6 315 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 FADS2P1A8MWK0 482 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 EIF4EP06730 217 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 HEXAP06865 529 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 DLG4P78352 724 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TDGQ13569 410 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TTMPQ5BVD1 217 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CPTPQ5TA50 214 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 OR8H1Q8NGG4 311 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 HM13Q8TCT9 377 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 LEF1Q9UJU2 399 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PHTF1Q9UMS5 762 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SORCS3Q9UPU3 1222 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ERVW-1Q9UQF0 538 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ABCA4P78363 2273 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF878C9JN71 531 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 F5H6K3 240 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 H3BNX3 289 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PRAMEF12O95522 483 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 KLK3P07288 261 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 KLRC3Q07444 240 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GCNT7Q6ZNI0 430 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TMPRSS6Q8IU80 811 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CMIPQ8IY22 773 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 HELQQ8TDG4 1101 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ASB12Q8WXK4 309 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 C1GALT1C1Q96EU7 318 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CNDP2Q96KP4 475 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CASD1Q96PB1 797 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PANX1Q96RD7 426 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF184Q99676 751 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SAP130Q9H0E3 1048 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 HPSEQ9Y251 543 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NPFFR2Q9Y5X5 522 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NPHP4O75161 1426 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 IGF1RP08069 1367 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 RAC2P15153 192 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CYP2C18P33260 490 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SSR2P43308 183 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 GBX2P52951 348 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PKNOX1P55347 436 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 FAM171A1Q5VUB5 890 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 FAM122CQ6P4D5 195 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 UNC5BQ8IZJ1 945 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 BPIFB6Q8NFQ5 453 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 CPT1BQ92523 772 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 SYN2Q92777 582 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PPCDCQ96CD2 204 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 IL12RB2Q99665 862 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 MKNK1Q9BUB5 465 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NUDT15Q9NV35 164 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 FAM118AQ9NWS6 357 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 BARX2Q9UMQ3 279 aaPredicted RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 NOP16Q9Y3C1 178 aaKnown RBP5.97□□□□□ -1.45
SCN1A-212ENST00000636194 PLEKHM1Q9Y4G2 1056 aa5.97□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3DA0A087WVF3 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3IA0A087WXS9 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3EA0A087X179 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3KA0A087X1G2 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3FA6NER0 549 aaPredicted RBP5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3LB9A6J9 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 CLDN25C9JDP6 229 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 PIP5K1BO14986 540 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3HP0C7X1 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 VDRP11473 427 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 VAMP1P23763 118 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 ERP29P30040 261 aaKnown RBP5.96□□□□□ -1.45
SCN1A-212ENST00000636194 CDK9P50750 372 aaKnown RBP5.96□□□□□ -1.45
SCN1A-212ENST00000636194 FABP6P51161 128 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 GRM4Q14833 912 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 RBM48Q5RL73 367 aaKnown RBP5.96□□□□□ -1.45
SCN1A-212ENST00000636194 MPP7Q5T2T1 576 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3GQ6DHY5 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 TBC1D3CQ6IPX1 549 aa5.96□□□□□ -1.45
SCN1A-212ENST00000636194 DEFB128Q7Z7B8 93 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms