RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 C16orf58Q96GQ5 468 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 HAPLN3Q96S86 360 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SLC6A15Q9H2J7 730 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TTYH1Q9H313 450 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SAR1AQ9NR31 198 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ARL8BQ9NVJ2 186 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 DKKL1Q9UK85 242 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SORCS3Q9UPU3 1222 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TCHHQ07283 1943 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 C5orf51A6NDU8 294 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SIGLEC16A6NMB1 481 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PITPNM1O00562 1244 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SCAMP3O14828 347 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PROCP04070 461 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 LINC00032P0C843 101 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MAPK10P53779 464 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ADARP55265 1226 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ARFRP1Q13795 201 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SPESP1Q6UW49 350 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 B3GNT6Q6ZMB0 384 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TMEM161BQ8NDZ6 487 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CCDC107Q8WV48 283 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TATDN2Q93075 761 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 NDNQ99608 321 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 B3GNT4Q9C0J1 378 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 WDR12Q9GZL7 423 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ADGRE2Q9UHX3 823 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CACNA1FO60840 1977 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 A0A0G2JMP0 313 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ADAMTS3O15072 1205 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SLC22A3O75751 556 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 FAM228BP0C875 321 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 RIDAP52758 137 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 SEC24CP53992 1094 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 LIPEQ05469 1076 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 POTEHQ6S545 545 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 LNX2Q8N448 690 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 OR4M2Q8NGB6 313 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 DGCR14Q96DF8 476 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 P2RX7Q99572 595 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 GPR20Q99678 358 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ANKHQ9HCJ1 492 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ERVK-18Q9QC07 812 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ELOA3DA6NLF2 546 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 C1RP00736 705 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 UROSP10746 265 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PCSK2P16519 638 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 RBM34P42696 430 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 APLP1P51693 650 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 CRISP1P54107 249 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 AIF1P55008 147 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ARPC4P59998 168 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PTENP60484 403 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MAD2L1BPQ15013 274 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MLC1Q15049 377 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ELOA3BQ3SY89 546 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 EOGTQ5NDL2 527 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 KBTBD2Q8IY47 623 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ELOA3Q8NG57 546 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 ZCCHC10Q8TBK6 192 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 EXOSC8Q96B26 276 aaKnown RBP5.51□□□□□ -1.53
SCN1A-209ENST00000635750 PHF12Q96QT6 1004 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 TIGARQ9NQ88 270 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 MAN2B2Q9Y2E5 1009 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 AK5Q9Y6K8 562 aa5.51□□□□□ -1.53
SCN1A-209ENST00000635750 FAM240BA0A1B0GVZ2 78 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 CPSF4LA6NMK7 179 aaKnown RBP5.5□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF878C9JN71 531 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 TP73O15350 636 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 PDPK1O15530 556 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 RIPK2O43353 540 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 USP12O75317 370 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 CDK14O94921 469 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 ERBB2P04626 1255 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 CFL1P23528 166 aaKnown RBP5.5□□□□□ -1.53
SCN1A-209ENST00000635750 KHKP50053 298 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 CASP5P51878 434 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 GCNT1Q02742 428 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 LACTB2Q53H82 288 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-209ENST00000635750 SLC30A10Q6XR72 485 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 TMPPEQ6ZT21 453 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 GPR142Q7Z601 462 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 RNF148Q8N7C7 305 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 SLC38A4Q969I6 547 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 MED28Q9H204 178 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 RC3H2Q9HBD1 1191 aaKnown RBP5.5□□□□□ -1.53
SCN1A-209ENST00000635750 MIOSQ9NXC5 875 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 ABCD2Q9UBJ2 740 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 C14orf166Q9Y224 244 aaKnown RBP5.5□□□□□ -1.53
SCN1A-209ENST00000635750 SLC31A1O15431 190 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 CLDN9O95484 217 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 ALADP13716 330 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 KDELR1P24390 212 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 CD52P31358 61 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 MPIP34949 423 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 CCNFP41002 786 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 GAD2Q05329 585 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 PRAMEF19Q5SWL8 479 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 OTOP2Q7RTS6 562 aa5.5□□□□□ -1.53
SCN1A-209ENST00000635750 ZER1Q7Z7L7 766 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms