RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 LRRC10BA6NIK2 292 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 CPNE3O75131 537 aaKnown RBP19.74■□□□□ 0.75
TARDBP-228ENST00000629725 LDLRP01130 860 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 HLA-DQB2P05538 268 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 EBLN1P0CF75 366 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 CCNCP24863 283 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 ARL4DP49703 201 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 MMRN1Q13201 1228 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 PIGHQ14442 188 aaPredicted RBP19.74■□□□□ 0.75
TARDBP-228ENST00000629725 IFI16Q16666 785 aaKnown RBP19.74■□□□□ 0.75
TARDBP-228ENST00000629725 IZUMO3Q5VZ72 239 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 SLC6A19Q695T7 634 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 PDPK2PQ6A1A2 396 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 ZNF547Q8IVP9 402 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 RHOT1Q8IXI2 618 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 TRAM1L1Q8N609 369 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 GPR26Q8NDV2 337 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 FDCSPQ8NFU4 85 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 MR1Q95460 341 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 FATE1Q969F0 183 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 PNPLA2Q96AD5 504 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 TRIM11Q96F44 468 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 TCTN2Q96GX1 697 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 HAUS4Q9H6D7 363 aa19.74■□□□□ 0.75
TARDBP-228ENST00000629725 VEGFDO43915 354 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 MTX2O75431 263 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 TMEM63AO94886 807 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 CDK14O94921 469 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 JCHAINP01591 159 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 MYBL1P10243 752 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 CDK11BP21127 795 aaKnown RBP19.73■□□□□ 0.75
TARDBP-228ENST00000629725 DCDC1P59894 354 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 SLC25A11Q02978 314 aaKnown RBP19.73■□□□□ 0.75
TARDBP-228ENST00000629725 KLHL35Q6PF15 583 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 ZNF571Q7Z3V5 609 aaPredicted RBP19.73■□□□□ 0.75
TARDBP-228ENST00000629725 NUP85Q9BW27 656 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 NUDT9Q9BW91 350 aa19.73■□□□□ 0.75
TARDBP-228ENST00000629725 ANKRD17O75179 2603 aaKnown RBP19.73■□□□□ 0.75
TARDBP-228ENST00000629725 SSU72P8A0A1W2PR75 194 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 LRRC53A6NM62 1247 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 ZNF185O15231 689 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 SCRG1O75711 98 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 CD48P09326 243 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 VCLP18206 1134 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 FECHP22830 423 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 CD86P42081 329 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 HALP42357 657 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 GALNT3Q14435 633 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 PAFAH1B3Q15102 231 aaKnown RBP19.72■□□□□ 0.75
TARDBP-228ENST00000629725 NCBP2-AS2Q69YL0 99 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 CERS6Q6ZMG9 384 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 ZNF517Q6ZMY9 492 aaPredicted RBP19.72■□□□□ 0.75
TARDBP-228ENST00000629725 KMT5CQ86Y97 462 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 TMEM126BQ8IUX1 230 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 RBMXL3Q8N7X1 1067 aaKnown RBP19.72■□□□□ 0.75
TARDBP-228ENST00000629725 ADAMTS17Q8TE56 1095 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 C5orf34Q96MH7 638 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 TSGA13Q96PP4 275 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 MAP3K3Q99759 626 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 RAD18Q9NS91 495 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 SNX7Q9UNH6 387 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 SHOC2Q9UQ13 582 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 SLC5A6Q9Y289 635 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 WDR37Q9Y2I8 494 aa19.72■□□□□ 0.75
TARDBP-228ENST00000629725 DDX3XO00571 662 aaKnown RBP eCLIP19.71■□□□□ 0.751e-28■■■■■ 35.7
TARDBP-228ENST00000629725 KLK3P07288 261 aaPredicted RBP19.71■□□□□ 0.75
TARDBP-228ENST00000629725 MMP2P08253 660 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 TNFRSF8P28908 595 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 TUBB4BP68371 445 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 HSD11B2P80365 405 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 GPS2Q13227 327 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 TUBB2AQ13885 445 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 NR6A1Q15406 480 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 ASIC2Q16515 512 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 LRRN4Q8WUT4 740 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 C19orf60Q96EN9 201 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 TUBB2BQ9BVA1 445 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 GPR83Q9NYM4 423 aa19.71■□□□□ 0.75
TARDBP-228ENST00000629725 NFKBIL1Q9UBC1 381 aaPredicted RBP19.71■□□□□ 0.75
TARDBP-228ENST00000629725 UBA6A0AVT1 1052 aaPredicted RBP19.7■□□□□ 0.74
TARDBP-228ENST00000629725 A6NL46 340 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 KRT86O43790 486 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 CBX6O95503 412 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 SLC4A1P02730 911 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 MYL5Q02045 173 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 DNTTIP2Q5QJE6 756 aaKnown RBP19.7■□□□□ 0.74
TARDBP-228ENST00000629725 MED25Q71SY5 747 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 APTXQ7Z2E3 356 aaKnown RBP19.7■□□□□ 0.74
TARDBP-228ENST00000629725 TMC3Q7Z5M5 1100 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 C11orf96Q7Z7L8 435 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 TRAPPC5Q8IUR0 188 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 D2HGDHQ8N465 521 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 ENDOVQ8N8Q3 282 aaKnown RBP19.7■□□□□ 0.74
TARDBP-228ENST00000629725 NIPA2Q8N8Q9 360 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 TMEM102Q8N9M5 508 aaPredicted RBP19.7■□□□□ 0.74
TARDBP-228ENST00000629725 SLC38A9Q8NBW4 561 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 FAM71BQ8TC56 605 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 SNRNP40Q96DI7 357 aaKnown RBP19.7■□□□□ 0.74
TARDBP-228ENST00000629725 CHST8Q9H2A9 424 aa19.7■□□□□ 0.74
TARDBP-228ENST00000629725 KCND1Q9NSA2 647 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms