RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 WASF2Q9Y6W5 498 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 ATG2AQ2TAZ0 1938 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 IGLV3-16A0A075B6K0 115 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 NCF1BA6NI72 391 aaPredicted RBP21.78■■□□□ 1.08
PNKP-220ENST00000627232 NCF1CA8MVU1 366 aaPredicted RBP21.78■■□□□ 1.08
PNKP-220ENST00000627232 RAD51BO15315 384 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 ADH1CP00326 375 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 S100BP04271 92 aaPredicted RBP21.78■■□□□ 1.08
PNKP-220ENST00000627232 CA3P07451 260 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 CBSLP0DN79 551 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 ADH5P11766 374 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 NCF1P14598 390 aaPredicted RBP21.78■■□□□ 1.08
PNKP-220ENST00000627232 VIPR1P32241 457 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 CBSP35520 551 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 DGKGP49619 791 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 AGTR2P50052 363 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 MTTPP55157 894 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 STX5Q13190 355 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 FASTKQ14296 549 aaKnown RBP21.78■■□□□ 1.08
PNKP-220ENST00000627232 PPP1R3AQ16821 1122 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 TTLL9Q3SXZ7 439 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 AAGABQ6PD74 315 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 SBSNQ6UWP8 590 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 PDPRQ8NCN5 879 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 RCN3Q96D15 328 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 C3orf30Q96M34 536 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 HGH1Q9BTY7 390 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 FAM126AQ9BYI3 521 aaPredicted RBP21.78■■□□□ 1.08
PNKP-220ENST00000627232 PFDN4Q9NQP4 134 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 RAD18Q9NS91 495 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 UTP6Q9NYH9 597 aaKnown RBP21.78■■□□□ 1.08
PNKP-220ENST00000627232 SLC27A6Q9Y2P4 619 aa21.78■■□□□ 1.08
PNKP-220ENST00000627232 PSMD12O00232 456 aaPredicted RBP21.77■■□□□ 1.08
PNKP-220ENST00000627232 EIF3FO00303 357 aaPredicted RBP21.77■■□□□ 1.08
PNKP-220ENST00000627232 PIP5K1BO14986 540 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 FKBP6O75344 327 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 TRIM16O95361 564 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 UROSP10746 265 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 CD1EP15812 388 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 ACADVLP49748 655 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 PKNOX1P55347 436 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 SLC34A1Q06495 639 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 ARHGEF7Q14155 803 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 CCDC6Q16204 474 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 EML3Q32P44 896 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 ADGRD2Q7Z7M1 963 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 RBM23Q86U06 439 aaKnown RBP21.77■■□□□ 1.08
PNKP-220ENST00000627232 CLDN19Q8N6F1 224 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 JADE3Q92613 823 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 LRRC3BQ96PB8 259 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 ZNF382Q96SR6 550 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 COPS8Q99627 209 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 MCOLN1Q9GZU1 580 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 AKTIPQ9H8T0 292 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 KCTD5Q9NXV2 234 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 DKK3Q9UBP4 350 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 OARD1Q9Y530 152 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 PIKFYVEQ9Y2I7 2098 aa21.77■■□□□ 1.08
PNKP-220ENST00000627232 PLXNA2O75051 1894 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 GRXCR1A8MXD5 290 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 TTC34A8MYJ7 566 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 E2F3O00716 465 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 GIPC1O14908 333 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 CRCPO75575 148 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 FOXA1P55317 472 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 DCDC1P59894 354 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 STX1BP61266 288 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 SEMG2Q02383 582 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 ART3Q13508 389 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 ATP13A5Q4VNC0 1218 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 SYVN1Q86TM6 617 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 HMGCLL1Q8TB92 370 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 CYB5D2Q8WUJ1 264 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 SMOXQ9NWM0 555 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 NFKBIL1Q9UBC1 381 aaPredicted RBP21.76■■□□□ 1.07
PNKP-220ENST00000627232 ANGPTL2Q9UKU9 493 aa21.76■■□□□ 1.07
PNKP-220ENST00000627232 UPK3BL1B0FP48 263 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 UPK3BL2E5RIL1 263 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 TRIM24O15164 1050 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 CHEK2O96017 543 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 LBPP18428 481 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 ITGB6P18564 788 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 RBBP7Q16576 425 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 DUSP6Q16828 381 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 BNC2Q6ZN30 1099 aaPredicted RBP21.75■■□□□ 1.07
PNKP-220ENST00000627232 GK5Q6ZS86 529 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 GPRIN3Q6ZVF9 776 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 PHYKPLQ8IUZ5 450 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 CHCHD4Q8N4Q1 142 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 KCNA7Q96RP8 456 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 CCT7Q99832 543 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 MRPL1Q9BYD6 325 aaKnown RBP21.75■■□□□ 1.07
PNKP-220ENST00000627232 TUBB1Q9H4B7 451 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 IL36AQ9UHA7 158 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 EIF2B4Q9UI10 523 aaKnown RBP21.75■■□□□ 1.07
PNKP-220ENST00000627232 FFAR2O15552 330 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 LEFTY1O75610 366 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 PDE5AO76074 875 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 PTDSS1P48651 473 aaKnown RBP21.75■■□□□ 1.07
PNKP-220ENST00000627232 AP2B1P63010 937 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms