RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 AHCTF1Q8WYP5 2266 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 GOLGA6L3A6NEY3 463 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 NVLO15381 856 aaKnown RBP21.99■■□□□ 1.11
SF1-220ENST00000626028 SNX2O60749 519 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 SUN1O94901 812 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 GAS8O95995 478 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 JMJD7P0C870 316 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 RALBP11234 206 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 MSH3P20585 1137 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 ITGALP20701 1170 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 PSMA3P25788 255 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 UBE2IP63279 158 aaKnown RBP21.99■■□□□ 1.11
SF1-220ENST00000626028 XIAPP98170 497 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 OLIG2Q13516 323 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 PHF19Q5T6S3 580 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 TMEM71Q6P5X7 295 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 SNX20Q7Z614 316 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 CCDC89Q8N998 374 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 RASGEF1AQ8N9B8 481 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 NUDT22Q9BRQ3 303 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 SEMA6CQ9H3T2 930 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 PRDM8Q9NQV8 689 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 POT1Q9NUX5 634 aa21.99■■□□□ 1.11
SF1-220ENST00000626028 IGHV5-10-1A0A0J9YXX1 117 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 AKT1P31749 480 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 UCNP55089 124 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 CDH17Q12864 832 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 SPARCL1Q14515 664 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 USP53Q70EK8 1073 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 TMPRSS9Q7Z410 1059 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 STYXQ8WUJ0 223 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 HNRNPLLQ8WVV9 542 aaKnown RBP21.98■■□□□ 1.11
SF1-220ENST00000626028 NLE1Q9NVX2 485 aaPredicted RBP21.98■■□□□ 1.11
SF1-220ENST00000626028 PAK5Q9P286 719 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 FKBPLQ9UIM3 349 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 LHX6Q9UPM6 363 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 JRKLQ9Y4A0 524 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 LOXL2Q9Y4K0 774 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 ZFYVE26Q68DK2 2539 aa21.98■■□□□ 1.11
SF1-220ENST00000626028 TRBV23OR9-2A0A075B6M9 112 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 MROH6A6NGR9 719 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 IFNB1P01574 187 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 HALP42357 657 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 SEMA5AQ13591 1074 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 PTPRCAPQ14761 206 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 SIX1Q15475 284 aaPredicted RBP21.97■■□□□ 1.11
SF1-220ENST00000626028 ZNF574Q6ZN55 896 aaPredicted RBP21.97■■□□□ 1.11
SF1-220ENST00000626028 NXPE1Q8N323 547 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 BEND7Q8N7W2 519 aaPredicted RBP21.97■■□□□ 1.11
SF1-220ENST00000626028 OR13C4Q8NGS5 318 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 C1orf54Q8WWF1 131 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 LINC00615Q96LM1 132 aaPredicted RBP21.97■■□□□ 1.11
SF1-220ENST00000626028 CRLS1Q9UJA2 301 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 KCTD3Q9Y597 815 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 SLC30A1Q9Y6M5 507 aa21.97■■□□□ 1.11
SF1-220ENST00000626028 PDZK1P1A8MUH7 402 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 CFAP99D6REC4 459 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 E7EVH7 732 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 POP7O75817 140 aaKnown RBP21.96■■□□□ 1.11
SF1-220ENST00000626028 VIPP01282 170 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 FGGP02679 453 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 THRAP10827 490 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 SKIDA1Q1XH10 827 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 COL28A1Q2UY09 1125 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 PLA2G4EQ3MJ16 856 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 BCL7AQ4VC05 210 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 BROXQ5VW32 411 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 FOXR1Q6PIV2 292 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 TMEM220Q6QAJ8 160 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 TRIM48Q8IWZ4 208 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 SPACA3Q8IXA5 215 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 AGBL5Q8NDL9 886 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 KCNE4Q8WWG9 221 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 PEX13Q92968 403 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 DCUN1D1Q96GG9 259 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 ETNK1Q9HBU6 452 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 RIMKLBQ9ULI2 386 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 DNAJC16Q9Y2G8 782 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 SSUH2Q9Y2M2 353 aa21.96■■□□□ 1.11
SF1-220ENST00000626028 IGLV3-16A0A075B6K0 115 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 TRBV5-4A0A0C4DH59 114 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 MGAT4DA6NG13 374 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 AP3B1O00203 1094 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 GPR39O43194 453 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 BRAFP15056 766 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 CD82P27701 267 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 CSF2RBP32927 897 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 CTSCP53634 463 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 CFHR1Q03591 330 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 TLE3Q04726 772 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 POU6F1Q14863 301 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 TMEM164Q5U3C3 297 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 METRNLQ641Q3 311 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 TMEM26Q6ZUK4 368 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 NLRP9Q7RTR0 991 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 CCDC74BQ96LY2 380 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 COPS8Q99627 209 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 SLC40A1Q9NP59 571 aa21.95■■□□□ 1.1
SF1-220ENST00000626028 EIF2B3Q9NR50 452 aaKnown RBP21.95■■□□□ 1.1
SF1-220ENST00000626028 ZNF624Q9P2J8 865 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms