RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-216ENST00000626000 UCK1Q9HA47 277 aa13.79□□□□□ -0.2
SNRPA1-216ENST00000626000 KCNK6Q9Y257 313 aa13.79□□□□□ -0.2
SNRPA1-216ENST00000626000 KCTD3Q9Y597 815 aa13.79□□□□□ -0.2
SNRPA1-216ENST00000626000 PTPRBP23467 1997 aa13.79□□□□□ -0.2
SNRPA1-216ENST00000626000 PLXNB3Q9ULL4 1909 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 KNTC1P50748 2209 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 A6NCN8 305 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 MGAT4DA6NG13 374 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 SDR42E2A6NKP2 422 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 MTX2O75431 263 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 MT-CO3P00414 261 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 FTH1P02794 183 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 GRIA1P42261 906 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 MLLT3P42568 568 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 PRLHRP49683 370 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 PLOD1Q02809 727 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 HHEXQ03014 270 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 TUBB2AQ13885 445 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 PTPRCAPQ14761 206 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 KHDC1Q4VXA5 237 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 FNBP1LQ5T0N5 605 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 RNF187Q5TA31 235 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 IYDQ6PHW0 289 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 TMEM220Q6QAJ8 160 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 MAATS1Q7Z4T9 603 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 SPRED1Q7Z699 444 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 ZNF547Q8IVP9 402 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 TRIM48Q8IWZ4 208 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 BBOF1Q8ND07 529 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 OR13J1Q8NGT2 312 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 OR6P1Q8NGX9 317 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 HM13Q8TCT9 377 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 CPT1BQ92523 772 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 TMEM159Q96B96 161 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 CCM2Q9BSQ5 444 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 TUBB2BQ9BVA1 445 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 STRADBQ9C0K7 418 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 NRSN2Q9GZP1 204 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 POT1Q9NUX5 634 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 PIH1D1Q9NWS0 290 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 SMARCAL1Q9NZC9 954 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 TBC1D29Q9UFV1 150 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 KLK13Q9UKR3 277 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 SOX13Q9UN79 622 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 VPS9D1Q9Y2B5 631 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 PRKAB1Q9Y478 270 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 MYLKQ15746 1914 aa13.78□□□□□ -0.2
SNRPA1-216ENST00000626000 CCDC162PA2VCL2 907 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 PRR19A6NJB7 356 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 NTN3O00634 580 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 SNX2O60749 519 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 POP7O75817 140 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 CPNE6O95741 557 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 XRCC1P18887 633 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 FOXN2P32314 431 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 RPA4Q13156 261 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 SQSTM1Q13501 440 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 MORF4L2Q15014 288 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 CCDC38Q502W7 563 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 DNAJC21Q5F1R6 531 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 MRNIPQ6NTE8 343 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 CASC4Q6P4E1 433 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 SYT10Q6XYQ8 523 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 NYAP1Q6ZVC0 841 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 C11orf96Q7Z7L8 435 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 SDCCAG8Q86SQ7 713 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 LRRC6Q86X45 466 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 LMNTD2Q8IXW0 634 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 LSMEM2Q8N112 164 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 NAT8LQ8N9F0 302 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 OR2L2Q8NH16 312 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 OR10G6Q8NH81 332 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 SLC37A2Q8TED4 501 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 HDAC10Q969S8 669 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 SLC38A3Q99624 504 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 LRRN3Q9H3W5 708 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 TREX1Q9NSU2 369 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 CATSPERZQ9NTU4 200 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 AKAP7Q9P0M2 348 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 CPNE7Q9UBL6 633 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 DKK4Q9UBT3 224 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 ST14Q9Y5Y6 855 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 HEBP2Q9Y5Z4 205 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 RNF215Q9Y6U7 377 aa13.77□□□□□ -0.21
SNRPA1-216ENST00000626000 FAM237BA0A1B0GVD1 139 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 LILRA5A6NI73 299 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 OR2AG2A6NM03 316 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 D6RAR5 112 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 DUX1O43812 170 aa13.76□□□□□ -0.21
SNRPA1-216ENST00000626000 GOT2P00505 430 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms