RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RBM12BQ8IXT5 1001 aaKnown RBP14.4□□□□□ -0.1
PNKP-218ENST00000625299 GPR26Q8NDV2 337 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 FDCSPQ8NFU4 85 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 TEKT4Q8WW24 435 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 GLYATL1Q969I3 302 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 SLC41A2Q96JW4 573 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ZNF514Q96K75 400 aaPredicted RBP14.4□□□□□ -0.1
PNKP-218ENST00000625299 BTBD6Q96KE9 485 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 MAP3K3Q99759 626 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 TIMM29Q9BSF4 260 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ZSCAN5AQ9BUG6 496 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ZFYVE1Q9HBF4 777 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 WASH6PQ9NQA3 447 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 FGF21Q9NSA1 209 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 EPHA6Q9UF33 1036 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 CHUKO15111 745 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 TMEM63AO94886 807 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 CDK14O94921 469 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 LDLRP01130 860 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 HALP42357 657 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 GPS2Q13227 327 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 RAPSNQ13702 412 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 GPR19Q15760 415 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 IFI16Q16666 785 aaKnown RBP14.39□□□□□ -0.11
PNKP-218ENST00000625299 DNTTIP2Q5QJE6 756 aaKnown RBP14.39□□□□□ -0.11
PNKP-218ENST00000625299 FAM69BQ5VUD6 431 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 NCBP2-AS2Q69YL0 99 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 ZNF547Q8IVP9 402 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 RHOT1Q8IXI2 618 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
PNKP-218ENST00000625299 TRAM1L1Q8N609 369 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 GPR150Q8NGU9 434 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 EID2BQ96D98 161 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 C19orf60Q96EN9 201 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 TRIM11Q96F44 468 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 FCRL4Q96PJ5 515 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 NUP85Q9BW27 656 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 NUDT9Q9BW91 350 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 ADGRE3Q9BY15 652 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 CHST8Q9H2A9 424 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 SNX7Q9UNH6 387 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 WDR37Q9Y2I8 494 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 ABCA12Q86UK0 2595 aa14.39□□□□□ -0.11
PNKP-218ENST00000625299 UBA6A0AVT1 1052 aaPredicted RBP14.38□□□□□ -0.11
PNKP-218ENST00000625299 DDX3XO00571 662 aaKnown RBP eCLIP14.38□□□□□ -0.11
PNKP-218ENST00000625299 MYBL1P10243 752 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 GZMAP12544 262 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 VCLP18206 1134 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 CCNCP24863 283 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 TNFRSF8P28908 595 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
PNKP-218ENST00000625299 LAMB3Q13751 1172 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 GTF2H3Q13889 308 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 PIGHQ14442 188 aaPredicted RBP14.38□□□□□ -0.11
PNKP-218ENST00000625299 KHDC1Q4VXA5 237 aaKnown RBP14.38□□□□□ -0.11
PNKP-218ENST00000625299 FAM182AQ5T1J6 154 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 AGAP9Q5VTM2 703 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 KLHL35Q6PF15 583 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 RBMXL3Q8N7X1 1067 aaKnown RBP14.38□□□□□ -0.11
PNKP-218ENST00000625299 ENDOVQ8N8Q3 282 aaKnown RBP14.38□□□□□ -0.11
PNKP-218ENST00000625299 GDAP1Q8TB36 358 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 PNPLA2Q96AD5 504 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 C5orf34Q96MH7 638 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 GPR63Q9BZJ6 419 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 RAB33BQ9H082 229 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 GPR83Q9NYM4 423 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 AMACRQ9UHK6 382 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 SRPK3Q9UPE1 567 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 PCDHGB7Q9Y5F8 929 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 CSMD1Q96PZ7 3565 aa14.38□□□□□ -0.11
PNKP-218ENST00000625299 DDX3YO15523 660 aaKnown RBP14.37□□□□□ -0.11
PNKP-218ENST00000625299 VEGFDO43915 354 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 CEACAM4O75871 244 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 JCHAINP01591 159 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 KLK3P07288 261 aaPredicted RBP14.37□□□□□ -0.11
PNKP-218ENST00000625299 MMP2P08253 660 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 LPOP22079 712 aaPredicted RBP14.37□□□□□ -0.11
PNKP-218ENST00000625299 FECHP22830 423 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 VARSP26640 1264 aaKnown RBP14.37□□□□□ -0.11
PNKP-218ENST00000625299 DCDC1P59894 354 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 HSD11B2P80365 405 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 MYL5Q02045 173 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 PAFAH1B3Q15102 231 aaKnown RBP14.37□□□□□ -0.11
PNKP-218ENST00000625299 PCSK7Q16549 785 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 KYNUQ16719 465 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 E4F1Q66K89 784 aaPredicted RBP14.37□□□□□ -0.11
PNKP-218ENST00000625299 PDPK2PQ6A1A2 396 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 WASH2PQ6VEQ5 465 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 BPHLQ86WA6 291 aaPredicted RBP14.37□□□□□ -0.11
PNKP-218ENST00000625299 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 RAD18Q9NS91 495 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 SOHLH2Q9NX45 425 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 MYO6Q9UM54 1294 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 PSMD13Q9UNM6 376 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 SLC5A6Q9Y289 635 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 ZNF711Q9Y462 761 aa14.37□□□□□ -0.11
PNKP-218ENST00000625299 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 TLCD2A6NGC4 264 aa14.36□□□□□ -0.11
PNKP-218ENST00000625299 F5H423 210 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms