RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NEK10Q6ZWH5 1172 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 TSPAN33Q86UF1 283 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 CHST14Q8NCH0 376 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 GIMAP7Q8NHV1 300 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 AGAP11Q8TF27 550 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 MRPL38Q96DV4 380 aaKnown RBP16.14■□□□□ 0.18
LDB3-208ENST00000623007 VPS35Q96QK1 796 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 ZNF382Q96SR6 550 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 FAM83CQ9BQN1 747 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 RNPEPL1Q9HAU8 725 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 HEPACAM2A8MVW5 462 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 GRXCR1A8MXD5 290 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 NPC1O15118 1278 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 SLC16A5O15375 505 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 FTH1P02794 183 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 C8GP07360 202 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 C1SP09871 688 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 CCR3P51677 355 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 CDKL1Q00532 357 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 ELAVL3Q14576 367 aaKnown RBP16.14■□□□□ 0.17
LDB3-208ENST00000623007 GSTA3Q16772 222 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 ARSIQ5FYB1 569 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 LDLRAP1Q5SW96 308 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 PLEKHS1Q5SXH7 462 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 ENDOVQ8N8Q3 282 aaKnown RBP16.14■□□□□ 0.17
LDB3-208ENST00000623007 PNPLA1Q8N8W4 532 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 KYQ8NBH2 561 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 JADE3Q92613 823 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 MAGEB10Q96LZ2 347 aaPredicted RBP16.14■□□□□ 0.17
LDB3-208ENST00000623007 LENG8Q96PV6 779 aaPredicted RBP16.14■□□□□ 0.17
LDB3-208ENST00000623007 SLC28A3Q9HAS3 691 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 RIC8BQ9NVN3 520 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 UTP6Q9NYH9 597 aaKnown RBP16.14■□□□□ 0.17
LDB3-208ENST00000623007 PCTPQ9UKL6 214 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 CDH7Q9ULB5 785 aa16.14■□□□□ 0.17
LDB3-208ENST00000623007 TTC34A8MYJ7 566 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 FFAR2O15552 330 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 TRIM16O95361 564 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 OTCP00480 354 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 MPC1LP0DKB6 136 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 ATP1B2P14415 290 aaPredicted RBP16.13■□□□□ 0.17
LDB3-208ENST00000623007 ITGB7P26010 798 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 CPOXP36551 454 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 MAGEA10P43363 369 aaPredicted RBP16.13■□□□□ 0.17
LDB3-208ENST00000623007 CCR10P46092 362 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 MRPL19P49406 292 aaKnown RBP16.13■□□□□ 0.17
LDB3-208ENST00000623007 RGS19P49795 217 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 SH3BP2P78314 561 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 FCHO2Q0JRZ9 810 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 HNRNPA1L2Q32P51 320 aaKnown RBP16.13■□□□□ 0.17
LDB3-208ENST00000623007 RNF165Q6ZSG1 346 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 CYP2U1Q7Z449 544 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 SPATA19Q7Z5L4 167 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 ULK2Q8IYT8 1036 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 TSPEARQ8WU66 669 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 UBTD2Q8WUN7 234 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 FAM136AQ96C01 138 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 HGH1Q9BTY7 390 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 THTPAQ9BU02 230 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 SPATA16Q9BXB7 569 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 SHCBP1LQ9BZQ2 653 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 NOP53Q9NZM5 478 aaKnown RBP16.13■□□□□ 0.17
LDB3-208ENST00000623007 SUN2Q9UH99 717 aa16.13■□□□□ 0.17
LDB3-208ENST00000623007 YBX2Q9Y2T7 364 aaKnown RBP16.13■□□□□ 0.17
LDB3-208ENST00000623007 DOCK6Q96HP0 2047 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 BBIP1A8MTZ0 92 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 UBFD1O14562 309 aaKnown RBP16.12■□□□□ 0.17
LDB3-208ENST00000623007 SKAP2O75563 359 aaPredicted RBP16.12■□□□□ 0.17
LDB3-208ENST00000623007 GSTM1P09488 218 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 TIMP2P16035 220 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 UGT1A6P19224 532 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 MSH3P20585 1137 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 UGT1A1P22309 533 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 UGT1A4P22310 534 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 UGT1A3P35503 534 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 UGT1A5P35504 534 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 CPA2P48052 419 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 GSTM4Q03013 218 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 PTPRRQ15256 657 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 UGT3A2Q3SY77 523 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 ATP13A5Q4VNC0 1218 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 OGFOD2Q6N063 350 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 SBSNQ6UWP8 590 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 GPRIN3Q6ZVF9 776 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 LARP4Q71RC2 724 aaKnown RBP eCLIP16.12■□□□□ 0.17
LDB3-208ENST00000623007 ZNF765Q7L2R6 523 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 NLRP8Q86W28 1048 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 YAF2Q8IY57 180 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 PHTF2Q8N3S3 785 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 DDHD1Q8NEL9 900 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 TRPC4APQ8TEL6 797 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 CYB5D2Q8WUJ1 264 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 TWIST2Q8WVJ9 160 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 RAB7BQ96AH8 199 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 FAM161BQ96MY7 647 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 SLC30A3Q99726 388 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 SLC25A23Q9BV35 468 aa16.12■□□□□ 0.17
LDB3-208ENST00000623007 ZCCHC2Q9C0B9 1178 aaKnown RBP16.12■□□□□ 0.17
LDB3-208ENST00000623007 DENND2DQ9H6A0 471 aaPredicted RBP16.12■□□□□ 0.17
LDB3-208ENST00000623007 PCDH12Q9NPG4 1184 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms