RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 PCDH8O95206 1070 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 SLC25A14O95258 325 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 TRIM16O95361 564 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 ATP1B2P14415 290 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 ATP5F1P24539 256 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 RGS4P49798 205 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 CCINQ13939 588 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 MLF2Q15773 248 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 TTLL9Q3SXZ7 439 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 TTC31Q49AM3 519 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 LIPMQ5VYY2 423 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 ZNF852Q6ZMS4 543 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 ZNF771Q7L3S4 317 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 OTOAQ7RTW8 1153 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 SPATA21Q7Z572 469 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 ISCA2Q86U28 154 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 PHYKPLQ8IUZ5 450 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 SLC22A9Q8IVM8 553 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 CACNA2D3Q8IZS8 1091 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 ANKS4BQ8N8V4 417 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 OR6Y1Q8NGX8 325 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 STAG3L4Q8TBR4 150 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 GLYATL1Q969I3 302 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 KIAA1191Q96A73 305 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 FAM131CQ96AQ9 280 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 CCDC97Q96F63 343 aaPredicted RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 LINGO1Q96FE5 620 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 PDLIM5Q96HC4 596 aaKnown RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 SEC16BQ96JE7 1060 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 UNKQ9C0B0 810 aaKnown RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 MKRN2Q9H000 416 aaKnown RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 LATS2Q9NRM7 1088 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 SPATS2LQ9NUQ6 558 aaKnown RBP6.91□□□□□ -1.3
CBWD3-219ENST00000622817 FBXL12Q9NXK8 326 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 GALPQ9UBC7 116 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 DUSP12Q9UNI6 340 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 COQ6Q9Y2Z9 468 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 C5orf42Q9H799 3197 aa6.91□□□□□ -1.3
CBWD3-219ENST00000622817 PLXNA2O75051 1894 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 IGLON5A6NGN9 336 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SHISA7A6NL88 538 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 FADS2P1A8MWK0 482 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 KPNA5O15131 536 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SNX3O60493 162 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SMIM24O75264 130 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 TGDSO95455 350 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 TSPAN12O95859 305 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 TPBGLP0DKB5 382 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 CBSLP0DN79 551 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 TROVE2P10155 538 aaKnown RBP eCLIP6.9□□□□□ -1.3
CBWD3-219ENST00000622817 IL9P15248 144 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 DGKAP23743 735 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 CBSP35520 551 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 GPR1P46091 355 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SLC1A6P48664 564 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 TAS2R38P59533 333 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 DNAJB13P59910 316 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 B4GALNT1Q00973 533 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 OCRLQ01968 901 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 PRKCQQ04759 706 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 AGERQ15109 404 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 RAET1GQ6H3X3 334 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 ZCCHC23Q6ZST2 131 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 USP30Q70CQ3 517 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 CACUL1Q86Y37 369 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 CRLF3Q8IUI8 442 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 ADHFE1Q8IWW8 467 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 CPNE9Q8IYJ1 553 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 ZBTB2Q8N680 514 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 CCDC197Q8NCU1 140 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 GIMAP7Q8NHV1 300 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 RPLP0P6Q8NHW5 317 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 PPP4R1Q8TF05 950 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 EEF1AKMT1Q8WVE0 214 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 PTERQ96BW5 349 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SGF29Q96ES7 293 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SIPA1Q96FS4 1042 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SLC30A3Q99726 388 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 ZCCHC2Q9C0B9 1178 aaKnown RBP6.9□□□□□ -1.3
CBWD3-219ENST00000622817 CD248Q9HCU0 757 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 FZD4Q9ULV1 537 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 MMP17Q9ULZ9 603 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 NCKAP1Q9Y2A7 1128 aa6.9□□□□□ -1.3
CBWD3-219ENST00000622817 MRPS17Q9Y2R5 130 aaKnown RBP6.9□□□□□ -1.3
CBWD3-219ENST00000622817 MTF2Q9Y483 593 aaPredicted RBP6.9□□□□□ -1.3
CBWD3-219ENST00000622817 SYCE1LA8MT33 242 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 EIF3FO00303 357 aaPredicted RBP6.9□□□□□ -1.31
CBWD3-219ENST00000622817 BTN3A1O00481 513 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 EBAG9O00559 213 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 PLRG1O43660 514 aaKnown RBP6.9□□□□□ -1.31
CBWD3-219ENST00000622817 KERAO60938 352 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 TM7SF2O76062 418 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 IPO13O94829 963 aaKnown RBP6.9□□□□□ -1.31
CBWD3-219ENST00000622817 SNUPNO95149 360 aaKnown RBP6.9□□□□□ -1.31
CBWD3-219ENST00000622817 FTH1P02794 183 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 ACADMP11310 421 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 ITGB6P18564 788 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 CD72P21854 359 aa6.9□□□□□ -1.31
CBWD3-219ENST00000622817 AOAHP28039 575 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms