RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 LMX1AQ8TE12 382 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 SGF29Q96ES7 293 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 CERS2Q96G23 380 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 C9orf72Q96LT7 481 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 FAM167BQ9BTA0 163 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 CLPBQ9H078 707 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 PRKAB1Q9Y478 270 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 GPSM3Q9Y4H4 160 aa17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 DNMT3AQ9Y6K1 912 aaPredicted RBP17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 TDRD6O60522 2096 aaKnown RBP17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 ARID1BQ8NFD5 2236 aaPredicted RBP17.23■□□□□ 0.35
SLC6A6-209ENST00000622176 LMO7DNF2Z398 122 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 KMOO15229 486 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 OR1I1O60431 355 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 AP2A2O94973 939 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 ERVK-10P10266 1014 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 CD59P13987 128 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 ZNF7P17097 686 aaPredicted RBP17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 C1orf61Q13536 156 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 RNF187Q5TA31 235 aaPredicted RBP17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 ZNF470Q6ECI4 717 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 ZNF449Q6P9G9 518 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 TMEM220Q6QAJ8 160 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 CRTC3Q6UUV7 619 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 CYS1Q717R9 158 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 DET1Q7L5Y6 550 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 C11orf96Q7Z7L8 435 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 GATAD2AQ86YP4 633 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 TRAPPC5Q8IUR0 188 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 CNTN4Q8IWV2 1026 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 OTUD6BQ8N6M0 293 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 UBXN4Q92575 508 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 TIMM29Q9BSF4 260 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 RRAGDQ9NQL2 400 aaPredicted RBP17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 ST14Q9Y5Y6 855 aa17.22■□□□□ 0.35
SLC6A6-209ENST00000622176 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 NEMP2A6NFY4 417 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 OR2AG2A6NM03 316 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 TPP1O14773 563 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 PFDN6O15212 129 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 NDUFS3O75489 264 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 S1PR4O95977 384 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 CELA2BP08218 269 aaPredicted RBP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 GIMD1P0DJR0 217 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 SSTR1P30872 391 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 PRLHRP49683 370 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 GPX6P59796 221 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 ARHGAP8P85298 464 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 CTBSQ01459 385 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 MGAT5Q09328 741 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 ILF3Q12906 894 aaKnown RBP eCLIP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 LVRNQ6Q4G3 990 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 C3orf62Q6ZUJ4 267 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 LRRC6Q86X45 466 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 NRROSQ86YC3 692 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 DENND6AQ8IWF6 608 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 CLDN19Q8N6F1 224 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 CCL4L1Q8NHW4 92 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 GABPB2Q8TAK5 448 aaPredicted RBP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 LPGAT1Q92604 370 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 LINC00615Q96LM1 132 aaPredicted RBP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 GSDMCQ9BYG8 508 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 LRRC4CQ9HCJ2 640 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 IARS2Q9NSE4 1012 aaKnown RBP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 INTS10Q9NVR2 710 aaKnown RBP17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 SLC23A2Q9UGH3 650 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 FBXO5Q9UKT4 447 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 VPS9D1Q9Y2B5 631 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 PLEKHM1Q9Y4G2 1056 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 PRSS21Q9Y6M0 314 aa17.21■□□□□ 0.35
SLC6A6-209ENST00000622176 KLHL33A6NCF5 533 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 PRR19A6NJB7 356 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 QSOX1O00391 747 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 YY2O15391 372 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 KCNJ13O60928 360 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 SPAG6O75602 509 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 POP7O75817 140 aaKnown RBP17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 ACP5P13686 325 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 RPS3P23396 243 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■□□ 16
SLC6A6-209ENST00000622176 SLC1A2P43004 574 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 CLCNKAP51800 687 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 ADARP55265 1226 aaKnown RBP17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 CTBP1Q13363 440 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 SLMAPQ14BN4 828 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 UAP1L1Q3KQV9 507 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 TEDDM1Q5T9Z0 273 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 KIAA0408Q6ZU52 694 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 CHST15Q7LFX5 561 aaPredicted RBP17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 ERMP1Q7Z2K6 904 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 GKN2Q86XP6 184 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 C2CD4AQ8NCU7 369 aaPredicted RBP17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 NETO1Q8TDF5 533 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 NAT14Q8WUY8 206 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.2■□□□□ 0.349e-7■■■■■ 57.1
SLC6A6-209ENST00000622176 P2RY12Q9H244 342 aa17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 PPANQ9NQ55 473 aaKnown RBP17.2■□□□□ 0.34
SLC6A6-209ENST00000622176 TCRBV9S1A1TA0A576 114 aa17.19■□□□□ 0.34
SLC6A6-209ENST00000622176 F8W8V4 182 aa17.19■□□□□ 0.34
SLC6A6-209ENST00000622176 FLRT2O43155 660 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms