RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CPNE9Q8IYJ1 553 aa18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 TBC1D3Q8IZP1 549 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 GBP7Q8N8V2 638 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 NECAB3Q96P71 396 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 LENG8Q96PV6 779 aaPredicted RBP18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 VPS35Q96QK1 796 aa18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 XPR1Q9UBH6 696 aa18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 TRMT6Q9UJA5 497 aaKnown RBP18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 MRPS17Q9Y2R5 130 aaKnown RBP18.37■□□□□ 0.53
SEMA6C-210ENST00000621728 CHURC1-FNTBB4DL54 471 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 TCP11X1B4DZS4 312 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 STK25O00506 426 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 ZBTB14O43829 449 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 SNX3O60493 162 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 ATP1B2P14415 290 aaPredicted RBP18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 TAC1P20366 129 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 DPTQ07507 201 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 SYT13Q7L8C5 426 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 BEND7Q8N7W2 519 aaPredicted RBP18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 PTERQ96BW5 349 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 SHDQ96IW2 340 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 TSNARE1Q96NA8 513 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 MYOCQ99972 504 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 POPDC3Q9HBV1 291 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 FZD3Q9NPG1 666 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 SCML1Q9UN30 329 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 NCKAP1Q9Y2A7 1128 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 COMMD10Q9Y6G5 202 aa18.36■□□□□ 0.53
SEMA6C-210ENST00000621728 OR2AG2A6NM03 316 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 G3V2L1 256 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 RAD51BO15315 384 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 BPGMP07738 259 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 C7P10643 843 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 MSH3P20585 1137 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 ALDH3A1P30838 453 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 CTSCP53634 463 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 CCDC15Q0P6D6 951 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 PDK4Q16654 411 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 TMEM259Q4ZIN3 620 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 RGS9BPQ6ZS82 235 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 USP30Q70CQ3 517 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 RASGEF1AQ8N9B8 481 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 EEF1AKMT1Q8WVE0 214 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 DCUN1D1Q96GG9 259 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 POLMQ9NP87 494 aaPredicted RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 ACSS2Q9NR19 701 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 FZD4Q9ULV1 537 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 DNAJC8O75937 253 aaPredicted RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 TSPAN12O95859 305 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 PYGLP06737 847 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 CD1DP15813 335 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 TFEBP19484 476 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 KCNC1P48547 511 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 DGKEP52429 567 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 RPS21P63220 83 aaKnown RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 ILF2Q12905 390 aaKnown RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 IRF4Q15306 451 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 FAM83EQ2M2I3 478 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 CCDC153Q494R4 210 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 TECRLQ5HYJ1 363 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 ZCCHC23Q6ZST2 131 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 PHYKPLQ8IUZ5 450 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 C10orf107Q8IVU9 208 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 RAVER1Q8IY67 606 aaKnown RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 SYNPOQ8N3V7 929 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 TP53I13Q8NBR0 393 aaPredicted RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 ZNF75CPQ92670 426 aaPredicted RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 ELAC2Q9BQ52 826 aaKnown RBP18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 C1QTNF2Q9BXJ5 285 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 ALG9Q9H6U8 611 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 COPG2Q9UBF2 871 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 DHRS7Q9Y394 339 aa18.35■□□□□ 0.53
SEMA6C-210ENST00000621728 TARM1B6A8C7 271 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 SF3A3Q12874 501 aaKnown RBP eCLIP18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 TMEM115Q12893 351 aaPredicted RBP18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 LDLRAP1Q5SW96 308 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 PNCKQ6P2M8 343 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 KBTBD6Q86V97 674 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 PACS2Q86VP3 889 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 HORMAD1Q86X24 394 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 NUDCD3Q8IVD9 361 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 FRMD1Q8N878 549 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 MOCOSQ96EN8 888 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 LINGO1Q96FE5 620 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 ASB2Q96Q27 587 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 LGR4Q9BXB1 951 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 SLC17A9Q9BYT1 436 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 SLCO1B3Q9NPD5 702 aa18.34■□□□□ 0.53
SEMA6C-210ENST00000621728 NEMP2A6NFY4 417 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 NEFHP12036 1026 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 CPA3P15088 417 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 CD9P21926 228 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 CCR7P32248 378 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 PXNP49023 591 aaPredicted RBP18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 OR4D1Q15615 310 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 TSNAXIP1Q2TAA8 658 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 ACSBG2Q5FVE4 666 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 AGAP9Q5VTM2 703 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 KIAA1161Q6NSJ0 714 aa18.33■□□□□ 0.53
SEMA6C-210ENST00000621728 FAM47EQ6ZV65 393 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms