RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MECP2P51608 486 aaKnown RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SNAPC1Q16533 368 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CPSF7Q8N684 471 aaKnown RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SNX33Q8WV41 574 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 HSPA12BQ96MM6 686 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 KCNS3Q9BQ31 491 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ABCD2Q9UBJ2 740 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 KLQ9UEF7 1012 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ITSN1Q15811 1721 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 A0A0G2JMP0 313 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TEX13CA0A0J9YWL9 993 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 OR6C70A6NIJ9 312 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 M0R129 80 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 IFNA10P01566 189 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 VTNP04004 478 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 MAPK3P27361 379 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 AIF1P55008 147 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CAV3P56539 151 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 AMHR2Q16671 573 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PFKFB4Q16877 469 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SYT16Q17RD7 645 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 BORAQ6PGQ7 559 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF571Q7Z3V5 609 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 OR4M2Q8NGB6 313 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PIGXQ8TBF5 258 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 IGDCC4Q8TDY8 1250 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CHTF18Q8WVB6 975 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CCDC74AQ96AQ1 378 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 FCRL4Q96PJ5 515 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 MIPEPQ99797 713 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 HIPK3Q9H422 1215 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PLEKHA1Q9HB21 404 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PCDH18Q9HCL0 1135 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ETNK2Q9NVF9 386 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 C1orf109Q9NX04 203 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 MTMR4Q9NYA4 1195 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ZMYM5Q9UJ78 669 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 C5orf51A6NDU8 294 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 NKRFO15226 690 aaKnown RBP eCLIP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 AGTR1P30556 359 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 UGT2B10P36537 528 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GALNT12Q8IXK2 581 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ZSWIM2Q8NEG5 633 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 OR2L2Q8NH16 312 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF431Q8TF32 576 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 RCN3Q96D15 328 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 RIPOR3Q96MK2 946 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 RNF38Q9H0F5 515 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 UNC93B1Q9H1C4 597 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 FKBP7Q9Y680 259 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 LRRIQ1Q96JM4 1722 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 IQCMA0A1B0GVH7 501 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 BTBD19C9JJ37 291 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 M0R233 179 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GFRA3O60609 400 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 LTFP02788 710 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 INHAP05111 366 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 EPORP19235 508 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SSTR1P30872 391 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SLC5A3P53794 718 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SLC10A7Q0GE19 358 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 BST1Q10588 318 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 DOK6Q6PKX4 331 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ZNF730Q6ZMV8 503 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CLIP3Q96DZ5 547 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GFM1Q96RP9 751 aaKnown RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 IFT27Q9BW83 186 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TLR10Q9BXR5 811 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 NELFAQ9H3P2 528 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TMEM27Q9HBJ8 222 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GJB4Q9NTQ9 266 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 UXTQ9UBK9 157 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 HPSEQ9Y251 543 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 HSBP1L1C9JCN9 74 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TSTD3H0UI37 97 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GTPBP1O00178 669 aaKnown RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PLEKP08567 350 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 JUPP14923 745 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 OR3A3P47888 321 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 OR3A2P47893 321 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TBC1D25Q3MII6 688 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 BRMS1LQ5PSV4 323 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 RNF220Q5VTB9 566 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 FBXO33Q7Z6M2 555 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 NATD1Q8N6N6 113 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ANKRD52Q8NB46 1076 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 DRAXINQ8NBI3 349 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 GLB1L3Q8NCI6 653 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SPATA22Q8NHS9 363 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SEC14L1Q92503 715 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 NR4A3Q92570 626 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SGCDQ92629 289 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 PLEKHA6Q9Y2H5 1048 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 TRPV2Q9Y5S1 764 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 MEGF6O75095 1541 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 C9IYK1 514 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 SHOX2O60902 331 aaPredicted RBP7.11□□□□□ -1.27
COLCA1-205ENST00000620864 ASLP04424 464 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 IFNA4P05014 189 aa7.11□□□□□ -1.27
COLCA1-205ENST00000620864 CLUP10909 449 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms