RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PKP2Q99959 881 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 FAIM2Q9BWQ8 316 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 BRD9Q9H8M2 597 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 CORO2BQ9UQ03 480 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 RAI2Q9Y5P3 530 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ZFP37Q9Y6Q3 630 aaPredicted RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PNMA8CA0A1B0GUJ8 204 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 E7ESA3 106 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PRMT3O60678 531 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 IL1BP01584 269 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 CAPGP40121 348 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 WNT7BP56706 349 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 NADK2Q4G0N4 442 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ANKRD23Q86SG2 305 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 ZHX1-C8orf76Q96EF9 292 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PIWIL1Q96J94 861 aaKnown RBP8.28□□□□□ -1.08
ALMS1-208ENST00000620466 RBPJLQ9UBG7 517 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 SLC2A6Q9UGQ3 507 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
ALMS1-208ENST00000620466 TTC24A2A3L6 582 aaPredicted RBP8.27□□□□□ -1.08
ALMS1-208ENST00000620466 OR4F21O95013 312 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 CCNDBP1O95273 360 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 NDST3O95803 873 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 SRSF11Q05519 484 aaKnown RBP8.27□□□□□ -1.08
ALMS1-208ENST00000620466 ABRQ12979 859 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 PAFAH1B3Q15102 231 aaKnown RBP8.27□□□□□ -1.08
ALMS1-208ENST00000620466 KRT73Q86Y46 540 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 ZBTB2Q8N680 514 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 GPR156Q8NFN8 814 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 GINS4Q9BRT9 223 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 SIRPGQ9P1W8 387 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 NENFQ9UMX5 172 aa8.27□□□□□ -1.08
ALMS1-208ENST00000620466 SLC25A14O95258 325 aaPredicted RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 IMPDH1P20839 514 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CXCR2P25025 360 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CCR10P46092 362 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 ZNF252P-AS1Q0IIN9 211 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 INCA1Q0VD86 236 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 USP41Q3LFD5 358 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 ARMC3Q5W041 872 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 FAM171BQ6P995 826 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 SERPINA13PQ6UXR4 307 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 EIF3MQ7L2H7 374 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 HJURPQ8NCD3 748 aaPredicted RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 KCTD13Q8WZ19 329 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 RBM4BQ9BQ04 359 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 RBM4Q9BWF3 364 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 LRTM1Q9HBL6 345 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 PSAT1Q9Y617 370 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 URADA6NGE7 173 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 OR51F1A6NGY5 319 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 GTPBP1O00178 669 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CCL16O15467 120 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 LINGO3P0C6S8 592 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 USP46P62068 366 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 MTAPQ13126 283 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 NDUFAF6Q330K2 333 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 LDLRAP1Q5SW96 308 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 TMC5Q6UXY8 1006 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CPA6Q8N4T0 437 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 KLHL23Q8NBE8 558 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 ZFP28Q8NHY6 868 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 ZNF671Q8TAW3 534 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 UBE2E3Q969T4 207 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 MCCC1Q96RQ3 725 aaPredicted RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 USP29Q9HBJ7 922 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CACNG4Q9UBN1 327 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 EIF2B4Q9UI10 523 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 OR10H1Q9Y4A9 318 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 KPNA5O15131 536 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 DLX3O60479 287 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 KHDRBS3O75525 346 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 H6PDO95479 791 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 MTHFD1P11586 935 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CDH3P22223 829 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 SLC7A1P30825 629 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 HERVK_113P63132 956 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CACNG1Q06432 222 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 RFX4Q33E94 735 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 FAAH2Q6GMR7 532 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 GALNT18Q6P9A2 607 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 DLK2Q6UY11 383 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 UBE2R2Q712K3 238 aaPredicted RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 AHI1Q8N157 1196 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CRYBG2Q8N1P7 616 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 SCAMP5Q8TAC9 235 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 EZH1Q92800 747 aaPredicted RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 ERVK-6Q9BXR3 956 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 FTHL17Q9BXU8 183 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 WDR12Q9GZL7 423 aaKnown RBP8.27□□□□□ -1.09
ALMS1-208ENST00000620466 XYLT2Q9H1B5 865 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 CLN6Q9NWW5 311 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 TOR4AQ9NXH8 423 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 ANGPT4Q9Y264 503 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 SH3GLB1Q9Y371 365 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 OR6C75A6NL08 312 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 A8MT66 165 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 NEDD8-MDP1E9PL57 170 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 WWP2O00308 870 aa8.27□□□□□ -1.09
ALMS1-208ENST00000620466 BCKDKO14874 412 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms