RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 LRRC38Q5VT99 294 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
MATR3-227ENST00000618441 DENND1BQ6P3S1 775 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 ZBTB33Q86T24 672 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 SLC41A1Q8IVJ1 513 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 ADGRG5Q8IZF4 528 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 OR8K3Q8NH51 312 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 SLC7A14Q8TBB6 771 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 ENKURQ8TC29 256 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 TBCDQ9BTW9 1192 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 PPIL3Q9H2H8 161 aaKnown RBP12.15□□□□□ -0.46
MATR3-227ENST00000618441 CYP3A43Q9HB55 503 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 ZIM2Q9NZV7 527 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 TMEM5Q9Y2B1 443 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 CTDSP2O14595 271 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 IFNA16P05015 189 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 HEXBP07686 556 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 PIGAP37287 484 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 SQLEQ14534 574 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 FBXO48Q5FWF7 155 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 YIPF7Q8N8F6 280 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 CHDHQ8NE62 594 aaPredicted RBP12.15□□□□□ -0.46
MATR3-227ENST00000618441 AGBL3Q8NEM8 1001 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 BCL7BQ9BQE9 202 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 WDR18Q9BV38 432 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 TMEM181Q9P2C4 612 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 NUP50Q9UKX7 468 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 SMIM30A4D0T7 59 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 FADS2P1A8MWK0 482 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 ZNF3P17036 446 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 PTPN5P54829 565 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 STARD3Q14849 445 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 SPDYE7PQ495Y7 208 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 CCDC149Q6ZUS6 474 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 PLD5Q8N7P1 536 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 ANKRD52Q8NB46 1076 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 FRS2Q8WU20 508 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 MARC2Q969Z3 335 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 YTHDF1Q9BYJ9 559 aaKnown RBP12.15□□□□□ -0.46
MATR3-227ENST00000618441 APOBEC3GQ9HC16 384 aaKnown RBP12.15□□□□□ -0.46
MATR3-227ENST00000618441 LAMP5Q9UJQ1 280 aa12.15□□□□□ -0.46
MATR3-227ENST00000618441 CST1P01037 141 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 KELP23276 732 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 CYP3A7P24462 503 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 SEC13P55735 322 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 GPR85P60893 370 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 YBX1P67809 324 aaKnown RBP12.15□□□□□ -0.47
MATR3-227ENST00000618441 CLCA4Q14CN2 919 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 CTU2Q2VPK5 515 aaKnown RBP12.15□□□□□ -0.47
MATR3-227ENST00000618441 RBM48Q5RL73 367 aaKnown RBP12.15□□□□□ -0.47
MATR3-227ENST00000618441 NOL9Q5SY16 702 aaKnown RBP12.15□□□□□ -0.47
MATR3-227ENST00000618441 UBQLNLQ8IYU4 475 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 FSTL5Q8N475 847 aaPredicted RBP12.15□□□□□ -0.47
MATR3-227ENST00000618441 COLGALT1Q8NBJ5 622 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 OR52K1Q8NGK4 314 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 ITFG1Q8TB96 612 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 POF1BQ8WVV4 589 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 MUL1Q969V5 352 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 MYOCQ99972 504 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 ARNT2Q9HBZ2 717 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 ABCB9Q9NP78 766 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 POLMQ9NP87 494 aaPredicted RBP12.15□□□□□ -0.47
MATR3-227ENST00000618441 OXSMQ9NWU1 459 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 LIMD1Q9UGP4 676 aa12.15□□□□□ -0.47
MATR3-227ENST00000618441 YDJCA8MPS7 323 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 EGFRP00533 1210 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 HNF4AP41235 474 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 RAP1GAPP47736 663 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 INPP1P49441 399 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 SMSP52788 366 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 ERVK-8P63133 956 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 IFRD2Q12894 506 aaPredicted RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 AP3B2Q13367 1082 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 RFTN1Q14699 578 aaPredicted RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 TDRD10Q5VZ19 366 aaKnown RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 HIPK1Q86Z02 1210 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 BBS7Q8IWZ6 715 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 OR6C4Q8NGE1 309 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 LENG9Q96B70 501 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 RBM18Q96H35 190 aaKnown RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 PPP1R2P1Q96PQ5 205 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 SLC30A3Q99726 388 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 USB1Q9BQ65 265 aaKnown RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 C1QTNF6Q9BXI9 259 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 BTRCQ9Y297 605 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 MYCLP12524 364 aaPredicted RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 GSK3BP49841 420 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 FRG1Q14331 258 aaKnown RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 TYW3Q6IPR3 259 aaKnown RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 RETREG3Q86VR2 466 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 PIK3C3Q8NEB9 887 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 ZNF516Q92618 1163 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 ZBTB45Q96K62 511 aaPredicted RBP12.14□□□□□ -0.47
MATR3-227ENST00000618441 LGMNQ99538 433 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 SDCBP2Q9H190 292 aa12.14□□□□□ -0.47
MATR3-227ENST00000618441 CLCA3PQ9Y6N3 262 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms