RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SLC4A9Q96Q91 983 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 AARSD1Q9BTE6 412 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 TRPS1Q9UHF7 1281 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CLEC4AQ9UMR7 237 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 COQ4Q9Y3A0 265 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 C2CD4BA6NLJ0 364 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CLDN9O95484 217 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 AMHP03971 560 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 PRPS2P11908 318 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CDH5P33151 784 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CXCR3P49682 368 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 RHDQ02161 417 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 TAF13Q15543 124 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 XKR5Q6UX68 686 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 FAM151BQ6UXP7 276 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 RPTNQ6XPR3 784 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CERS6Q6ZMG9 384 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 UBE2J2Q8N2K1 259 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 DCBLD1Q8N8Z6 715 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 VANGL1Q8TAA9 524 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 PCDH19Q8TAB3 1148 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC13A3Q8WWT9 602 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 SIPA1Q96FS4 1042 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 NFKBIZQ9BYH8 718 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 DNAJC11Q9NVH1 559 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 OXSMQ9NWU1 459 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 PCDHGA3Q9Y5H0 932 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 DISP2A7MBM2 1401 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 NOTOA8MTQ0 251 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 hCG_2039718K7EN88 272 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 WNT10BO00744 389 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 ITM2AO43736 263 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CLPXO76031 633 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 NDST3O95803 873 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 LINGO3P0C6S8 592 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CDH1P12830 882 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 RORCP51449 518 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 NPTX1Q15818 432 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 TIGD6Q17RP2 521 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 FBXL19Q6PCT2 694 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 OR8H3Q8N146 312 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 TNFAIP8L1Q8WVP5 186 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 LMAN2LQ9H0V9 348 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 DCSTAMPQ9H295 470 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 NEK6Q9HC98 313 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 SNTG1Q9NSN8 517 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 A0A0X1KG70 313 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 M0QX08 132 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 HMGB3O15347 200 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 OR4F21O95013 312 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF24P17028 368 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CTPS1P17812 591 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 OGNP20774 298 aaKnown RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 CDH12P55289 794 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 FCGRTP55899 365 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 PEX5LQ8IYB4 626 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 ERMAPQ96PL5 475 aaPredicted RBP10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 TSPAN18Q96SJ8 248 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 KCNN2Q9H2S1 579 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 C12orf4Q9NQ89 552 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC35C2Q9NQQ7 365 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 SEMA3GQ9NS98 782 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 KCTD5Q9NXV2 234 aa10.56□□□□□ -0.72
CLTCL1-209ENST00000617103 FAM234BA2RU67 622 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 CCRL2O00421 344 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 NDUFB5O43674 189 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ARF4P18085 180 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 RPL9P32969 192 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ADCYAP1R1P41586 468 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 YAP1P46937 504 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 PPP2R2BQ00005 443 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 CXorf57Q6NSI4 855 aaKnown RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 LDB1Q86U70 411 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 OAFQ86UD1 273 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 MON1AQ86VX9 555 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 DNAJB8Q8NHS0 232 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 C9orf43Q8TAL5 461 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 FCRL4Q96PJ5 515 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TOR3AQ9H497 397 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 FAM124BQ9H5Z6 455 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 OR14I1A6ND48 311 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 PMM2O15305 246 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 CCNB2O95067 398 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 CYP11A1P05108 521 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 ADORA2AP29274 412 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 HTR7P34969 479 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 HUNKP57058 714 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SLC18A2Q05940 514 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SMCO1Q147U7 214 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TEAD4Q15561 434 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TSTD2Q5T7W7 516 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 CPNE8Q86YQ8 564 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TMEM126BQ8IUX1 230 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 CENPSQ8N2Z9 138 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 MPP5Q8N3R9 675 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 TRPV3Q8NET8 790 aa10.55□□□□□ -0.72
CLTCL1-209ENST00000617103 BSNDQ8WZ55 320 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms