RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 GALNT13Q8IUC8 556 aa16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 RBFAQ8N0V3 343 aa16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 GPR150Q8NGU9 434 aa16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 GABPB2Q8TAK5 448 aaPredicted RBP16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 PDXPQ96GD0 296 aa16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 TCEAL2Q9H3H9 227 aaPredicted RBP16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 TDRD6O60522 2096 aaKnown RBP16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 TMEM131Q92545 1883 aa16.18■□□□□ 0.18
SPTSSB-204ENST00000617024 TP53BP1Q12888 1972 aaPredicted RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 CELSR3Q9NYQ7 3312 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 NEMP2A6NFY4 417 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 C4orf47A7E2U8 309 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 GOLGA8KD6RF30 607 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 GOLGA8TH3BQL2 631 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 CHUKO15111 745 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 SCAMP1O15126 338 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 KMOO15229 486 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 AQP9O43315 295 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 PCDHGA12O60330 932 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 SDC3O75056 442 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 NDUFS3O75489 264 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 PIAS2O75928 621 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 ATP1B2P14415 290 aaPredicted RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 DGKAP23743 735 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 TTPAP49638 278 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 NOVA1P51513 510 aaKnown RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 FOXC1Q12948 553 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 SLC14A1Q13336 389 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 C1orf61Q13536 156 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 ITIH4Q14624 930 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 UAP1L1Q3KQV9 507 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 STEAP4Q687X5 459 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 KCTD16Q68DU8 428 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 LMNTD2Q8IXW0 634 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 FSTL5Q8N475 847 aaPredicted RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 RASGEF1AQ8N9B8 481 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 CALML6Q8TD86 181 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 LMX1AQ8TE12 382 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 SAP25Q8TEE9 199 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 ZNF514Q96K75 400 aaPredicted RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 OR2M4Q96R27 311 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 TCF12Q99081 682 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 FMO2Q99518 471 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 WDR83Q9BRX9 315 aaKnown RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 TMEM168Q9H0V1 697 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 TRNAU1APQ9NX07 287 aaKnown RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 IL1RAPL1Q9NZN1 696 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 MARCH4Q9P2E8 410 aaPredicted RBP16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 NFU1Q9UMS0 254 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 GPR34Q9UPC5 381 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 PRKAB1Q9Y478 270 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 PCDHGB2Q9Y5G2 931 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 CSNK1G3Q9Y6M4 447 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 BPTFQ12830 3046 aa16.17■□□□□ 0.18
SPTSSB-204ENST00000617024 PLXNB3Q9ULL4 1909 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 IGLV3-16A0A075B6K0 115 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 ERVK-10P10266 1014 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 ZNF7P17097 686 aaPredicted RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 EPHA8P29322 1005 aaPredicted RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 NSG1P42857 185 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 B4GALNT1Q00973 533 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 SEMA3AQ14563 771 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 SMAD1Q15797 465 aaKnown RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 HSP90AA5PQ58FG0 334 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 C3orf62Q6ZUJ4 267 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 DET1Q7L5Y6 550 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 LDB1Q86U70 411 aaPredicted RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 LRRTM4Q86VH4 590 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 KCNMB4Q86W47 210 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 GKN2Q86XP6 184 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 GATAD2AQ86YP4 633 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 TRAPPC5Q8IUR0 188 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 SDR16C5Q8N3Y7 309 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 ANKRD7Q92527 254 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 GATA6Q92908 595 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 SGF29Q96ES7 293 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 BOCQ9BWV1 1114 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 CAAP1Q9H8G2 361 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 PPANQ9NQ55 473 aaKnown RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 IARS2Q9NSE4 1012 aaKnown RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 ARGLU1Q9NWB6 273 aaPredicted RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 UCKL1Q9NWZ5 548 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 DOLKQ9UPQ8 538 aa16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 DNMT3AQ9Y6K1 912 aaPredicted RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 GCN1Q92616 2671 aaKnown RBP16.16■□□□□ 0.18
SPTSSB-204ENST00000617024 OR2AG2A6NM03 316 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 F8W8V4 182 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 AP2A2O94973 939 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 GSTA2P09210 222 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 OGNP20774 298 aaKnown RBP16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 ECHS1P30084 290 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 CTSCP53634 463 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 ILF3Q12906 894 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 FRG1Q14331 258 aaKnown RBP16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 CRTC3Q6UUV7 619 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 PACS1Q6VY07 963 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 DBX2Q6ZNG2 339 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 CHST15Q7LFX5 561 aaPredicted RBP16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 TAF8Q7Z7C8 310 aa16.15■□□□□ 0.18
SPTSSB-204ENST00000617024 CILP2Q8IUL8 1156 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms