RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 METTL7BQ6UX53 244 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SLC16A12Q6ZSM3 486 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SAMD7Q7Z3H4 446 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TFAP2DQ7Z6R9 452 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 P3H2Q8IVL5 708 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 OR2T12Q8NG77 320 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 OR6Q1Q8NGQ2 317 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CLHC1Q8NHS4 586 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CDC26Q8NHZ8 85 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SH3RF2Q8TEC5 729 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 UBASH3BQ8TF42 649 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SLC47A1Q96FL8 570 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 KLHL5Q96PQ7 755 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 KIFC1Q9BW19 673 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 BTBD3Q9Y2F9 522 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TPRKBQ9Y3C4 175 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 GMPPBQ9Y5P6 360 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 USP3Q9Y6I4 520 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 OAS3Q9Y6K5 1087 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 COL24A1Q17RW2 1714 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 A0A1B0GTL3 188 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CCDC162PA2VCL2 907 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 KRT87PA6NCN2 255 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PRMT5O14744 637 aaPredicted RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 DCLK1O15075 740 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 AIREO43918 545 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TSC22D2O75157 780 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 FKBP9O95302 570 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ARIH2O95376 493 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 EGFRP00533 1210 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ALPLP05186 524 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 EIF2S1P05198 315 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 RAP2AP10114 183 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 UMPSP11172 480 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CHRNB1P11230 501 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PRDX3P30048 256 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 PPP5CP53041 499 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 DNAJB13P59910 316 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 IFITM2Q01629 132 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PRKG2Q13237 762 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TP53BP2Q13625 1128 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PAFAH1B3Q15102 231 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 CTF1Q16619 201 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 AAK1Q2M2I8 961 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 DPY19L1Q2PZI1 675 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 FBXO47Q5MNV8 452 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ANKS6Q68DC2 871 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 BLOC1S3Q6QNY0 202 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 FKBP9P1Q75LS8 142 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SLC22A15Q8IZD6 547 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 UBE2FQ969M7 185 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 PTERQ96BW5 349 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 OMA1Q96E52 524 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TBATAQ96M53 351 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 KCNS3Q9BQ31 491 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CHCHD6Q9BRQ6 235 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 UGT2B28Q9BY64 529 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 TRIM54Q9BYV2 358 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 AMBRA1Q9C0C7 1298 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 HOXD1Q9GZZ0 328 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 SMOC2Q9H3U7 446 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 GLOD4Q9HC38 313 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ZBTB20Q9HC78 741 aaPredicted RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 RPRD1BQ9NQG5 326 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 PAQR5Q9NXK6 330 aaPredicted RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 USE1Q9NZ43 259 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 EHD3Q9NZN3 535 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CD274Q9NZQ7 290 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 CDH9Q9ULB4 789 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 NME7Q9Y5B8 376 aa6.61□□□□□ -1.35
LMO3-235ENST00000616247 ZFC3H1O60293 1989 aaKnown RBP6.61□□□□□ -1.35
LMO3-235ENST00000616247 ARVCFO00192 962 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 NCAM2O15394 837 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 MED26O95402 600 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 CD4P01730 458 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 HTR1AP08908 422 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 SLC2A4P14672 509 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 ITIH1P19827 911 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 HRH2P25021 359 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 CASP3P42574 277 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 AGTR2P50052 363 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 ARHGDIAP52565 204 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 GEMP55040 296 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 HERVK_113P63132 956 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 ACAP2Q15057 778 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 SOWAHCQ53LP3 525 aaPredicted RBP6.6□□□□□ -1.35
LMO3-235ENST00000616247 SPANXN2Q5MJ10 180 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 ARMC4Q5T2S8 1044 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 HACD2Q6Y1H2 254 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 NIM1KQ8IY84 436 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 PHACTR4Q8IZ21 702 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 ASCC1Q8N9N2 400 aaKnown RBP6.6□□□□□ -1.35
LMO3-235ENST00000616247 MINDY2Q8NBR6 621 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 DUS3LQ96G46 650 aaKnown RBP6.6□□□□□ -1.35
LMO3-235ENST00000616247 TNIP3Q96KP6 325 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 ZNF560Q96MR9 790 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 CENPOQ9BU64 300 aa6.6□□□□□ -1.35
LMO3-235ENST00000616247 TRMOQ9BU70 441 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms