RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 B4GALNT4Q76KP1 1039 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 ZNF547Q8IVP9 402 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 SPATA22Q8NHS9 363 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 GLOD4Q9HC38 313 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 WASH6PQ9NQA3 447 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 IFNKQ9P0W0 207 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 NENFQ9UMX5 172 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 PLAAQ9Y263 795 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMN2-213ENST00000614240 PTPN13Q12923 2485 aa17.54■□□□□ 0.4
SMN2-213ENST00000614240 A0A0A6YYK5 440 aaPredicted RBP17.53■□□□□ 0.4
SMN2-213ENST00000614240 ZNF487B1APH4 448 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 RFPL1O75677 317 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 MT-CYBP00156 380 aaPredicted RBP17.53■□□□□ 0.4
SMN2-213ENST00000614240 KRT1P04264 644 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 FGF5P12034 268 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 NR1D1P20393 614 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 ARL4DP49703 201 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 TMEM115Q12893 351 aaPredicted RBP17.53■□□□□ 0.4
SMN2-213ENST00000614240 SLC14A2Q15849 920 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMN2-213ENST00000614240 KHDC1Q4VXA5 237 aaKnown RBP17.53■□□□□ 0.4
SMN2-213ENST00000614240 SLC9A4Q6AI14 798 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 TCTN3Q6NUS6 607 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 ASB18Q6ZVZ8 466 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 ATCAYQ86WG3 371 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 BRSK1Q8TDC3 778 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 KLHL6Q8WZ60 621 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 ANP32EQ9BTT0 268 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 XPO4Q9C0E2 1151 aaKnown RBP17.53■□□□□ 0.4
SMN2-213ENST00000614240 UBP1Q9NZI7 540 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 RARRES3Q9UL19 164 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
SMN2-213ENST00000614240 SYCE3A1L190 88 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 AURKAO14965 403 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 AKR1B10O60218 316 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 CREG1O75629 220 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 TMEM253P0C7T8 217 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 TNNT1P13805 278 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 NELFEP18615 380 aaKnown RBP17.52■□□□□ 0.4
SMN2-213ENST00000614240 TUBB3Q13509 450 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 DNASE1L3Q13609 305 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 ATP13A5Q4VNC0 1218 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 TEX44Q53QW1 395 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 KLHL35Q6PF15 583 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 VSIG1Q86XK7 387 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 SIDT2Q8NBJ9 832 aaKnown RBP17.52■□□□□ 0.4
SMN2-213ENST00000614240 SLC35G2Q8TBE7 412 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 RNF25Q96BH1 459 aaPredicted RBP17.52■□□□□ 0.4
SMN2-213ENST00000614240 VPS35Q96QK1 796 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 ZCCHC2Q9C0B9 1178 aaKnown RBP17.52■□□□□ 0.4
SMN2-213ENST00000614240 ZNHIT6Q9NWK9 470 aaKnown RBP17.52■□□□□ 0.4
SMN2-213ENST00000614240 EPHA6Q9UF33 1036 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 MAN2B2Q9Y2E5 1009 aa17.52■□□□□ 0.4
SMN2-213ENST00000614240 C3orf70A6NLC5 250 aaPredicted RBP17.51■□□□□ 0.39
SMN2-213ENST00000614240 MTSS1O43312 755 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 KCNJ13O60928 360 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 TPM3P06753 285 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 FURINP09958 794 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 PLCL1Q15111 1095 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 TMEM135Q86UB9 458 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 AMZ2Q86W34 360 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 FAM26EQ8N5C1 309 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 CT55Q8WUE5 264 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 UBXN4Q92575 508 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 TADA1Q96BN2 335 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 LHX9Q9NQ69 397 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 TLK1Q9UKI8 766 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 TMPRSS11EQ9UL52 423 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 WDR37Q9Y2I8 494 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 DOPEY2Q9Y3R5 2298 aa17.51■□□□□ 0.39
SMN2-213ENST00000614240 K7EM74 188 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 POP7O75817 140 aaKnown RBP17.5■□□□□ 0.39
SMN2-213ENST00000614240 NTRK1P04629 796 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 GP1BBP13224 206 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 FECHP22830 423 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 PTPN3P26045 913 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 HNRNPH3P31942 346 aaKnown RBP17.5■□□□□ 0.39
SMN2-213ENST00000614240 HMGCLP35914 325 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 ARHGAP25P42331 645 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 PMS2P54278 862 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 PDE1BQ01064 536 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 PPP2R5EQ16537 467 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 ZDHHC20Q5W0Z9 365 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 BZW1Q7L1Q6 419 aaKnown RBP17.5■□□□□ 0.39
SMN2-213ENST00000614240 C11orf96Q7Z7L8 435 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 SLC25A41Q8N5S1 370 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 OLFM3Q96PB7 478 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 RAB33BQ9H082 229 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 TRABDQ9H4I3 376 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 FAM153AQ9UHL3 310 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 PSMD13Q9UNM6 376 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 PCDHGA6Q9Y5G7 932 aa17.5■□□□□ 0.39
SMN2-213ENST00000614240 IGHV5-51A0A0C4DH38 117 aa17.49■□□□□ 0.39
SMN2-213ENST00000614240 GOLGA6L3A6NEY3 463 aa17.49■□□□□ 0.39
SMN2-213ENST00000614240 C21orf140B9A014 251 aa17.49■□□□□ 0.39
SMN2-213ENST00000614240 TIAF1O95411 115 aa17.49■□□□□ 0.39
SMN2-213ENST00000614240 FOLR1P15328 257 aa17.49■□□□□ 0.39
SMN2-213ENST00000614240 PBLDP30039 288 aaPredicted RBP17.49■□□□□ 0.39
SMN2-213ENST00000614240 SPAM1P38567 509 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms