RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 PLK4O00444 970 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 DYNC1LI2O43237 492 aaPredicted RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 TREHO43280 583 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CCNT2O60583 730 aaKnown RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 LPXNO60711 386 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 NOL3O60936 208 aaKnown RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CPNE3O75131 537 aaKnown RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 AVILO75366 819 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 RFPL1O75677 317 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 GRAP2O75791 330 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 RGS9O75916 674 aaPredicted RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 RECQL4O94761 1208 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CDK14O94921 469 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SLITRK5O94991 958 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 GUCA1CO95843 209 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 IL6P05231 212 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 DLDP09622 509 aaKnown RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SMIM10L2AP0DMW4 78 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SMIM10L2BP0DMW5 78 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 THRAP10827 490 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 STMN1P16949 149 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 TMEM11P17152 192 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 TFE3P19532 575 aaPredicted RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 NR4A1P22736 598 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CNTFP26441 200 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CRHR1P34998 444 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 FDFT1P37268 417 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 GARSP41250 739 aaKnown RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 MAPK8P45983 427 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 ALDH3B2P48448 385 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 POU3F4P49335 361 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 GLUD2P49448 558 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 TAF6P49848 677 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SERPINB9P50453 376 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CRYBB1P53674 252 aaPredicted RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 LILRA4P59901 499 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 BTKQ06187 659 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 FRG1Q14331 258 aaKnown RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 PON2Q15165 354 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SGCAQ16586 387 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CCL15Q16663 113 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 BRMS1LQ5PSV4 323 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF618Q5T7W0 954 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 KCNT2Q6UVM3 1135 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 PAQR9Q6ZVX9 377 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 GPR180Q86V85 440 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 COLGALT2Q8IYK4 626 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 MICU2Q8IYU8 434 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 ADGRF2Q8IZF7 708 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CAMKK1Q8N5S9 505 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 PIK3C3Q8NEB9 887 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 OR5H6Q8NGV6 325 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 PIK3R3Q92569 461 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 TP53INP1Q96A56 240 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 RAB7BQ96AH8 199 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 OXNAD1Q96HP4 312 aaPredicted RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF560Q96MR9 790 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 QKIQ96PU8 341 aaKnown RBP eCLIP6.65□□□□□ -1.353e-6■■■□□ 14.9
CDKAL1-204ENST00000613575 PPP1R16BQ96T49 567 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 NPY6RQ99463 290 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 MDFIQ99750 246 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 APBA2Q99767 749 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 WDR12Q9GZL7 423 aaKnown RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CRLF2Q9HC73 371 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SMYD2Q9NRG4 433 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 POLR3BQ9NW08 1133 aaPredicted RBP6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SIRPGQ9P1W8 387 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 SLC17A7Q9P2U7 560 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 CPNE7Q9UBL6 633 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 TRPS1Q9UHF7 1281 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 BCAP29Q9UHQ4 241 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 STOML2Q9UJZ1 356 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 FZD10Q9ULW2 581 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 PRELID3BQ9Y3B1 194 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 DTNAQ9Y4J8 743 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 PCDHGA2Q9Y5H1 932 aa6.65□□□□□ -1.35
CDKAL1-204ENST00000613575 A0A0A0MRY4 1105 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 A0A1W2PRG6 482 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CXorf49A8MYA2 514 aaPredicted RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CHURC1-FNTBB4DL54 471 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 C9IYK1 514 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 I3L4J1 428 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 M0R082 166 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PIK3R2O00459 728 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 EIF1AYO14602 144 aaKnown RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 NTRK1P04629 796 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 APRTP07741 180 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ZNF865P0CJ78 1059 aaPredicted RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ATP6V1B1P15313 513 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 YBX3P16989 372 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ALOX12P18054 663 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PMLP29590 882 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 CD86P42081 329 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 PCP4P48539 62 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 HOXA1P49639 335 aaPredicted RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 YWHAGP61981 247 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 RNF4P78317 190 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 MRPS5P82675 430 aaKnown RBP6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 ZBTB16Q05516 673 aa6.64□□□□□ -1.35
CDKAL1-204ENST00000613575 RIPPLY1Q0D2K3 151 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms