RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CPNE2Q96FN4 548 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 BAZ2AQ9UIF9 1905 aaKnown RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 MCIDASD6RGH6 385 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 H3BSA7 217 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 PRAF2O60831 178 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 PPP5CP53041 499 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 SELPLGQ14242 412 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 SWSAP1Q6NVH7 229 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 WDSUB1Q8N9V3 476 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ACBD4Q8NC06 268 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 EPS8L1Q8TE68 723 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TMEM176AQ96HP8 235 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TLR8Q9NR97 1041 aaKnown RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 ARHGEF15O94989 841 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 FSHRP23945 695 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 UBXN2AP68543 259 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 DNASE1L3Q13609 305 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 GLYATQ6IB77 296 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 UTS2BQ765I0 119 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ANKRD53Q8N9V6 530 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 RNF149Q8NC42 400 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 PIGXQ8TBF5 258 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ZNF436Q9C0F3 470 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 ERVK-5Q9HDB9 667 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 UGT2B10P36537 528 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TAF6P49848 677 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 POU6F1Q14863 301 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 GPR162Q16538 588 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 NFE2Q16621 373 aaPredicted RBP8.7□□□□□ -1.02
TTC28-208ENST00000612946 LRRC57Q8N9N7 239 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 SLC4A11Q8NBS3 891 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 OR8K3Q8NH51 312 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 HCN3Q9P1Z3 774 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 NYAP2Q9P242 653 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 SCP2D1Q9UJQ7 156 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TMEM2Q9UHN6 1383 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 MYOM1P52179 1685 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 PER2O15055 1255 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 IL4RP24394 825 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 ALDH3B2P48448 385 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 IL31Q6EBC2 164 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 MTSS1LQ765P7 747 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 TMC8Q8IU68 726 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 BEST4Q8NFU0 473 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 RXFP2Q8WXD0 754 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 LRTOMTQ8WZ04 291 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 NPAS2Q99743 824 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 COL15A1P39059 1388 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 SCN4AP35499 1836 aa8.7□□□□□ -1.02
TTC28-208ENST00000612946 A0A087WZ62 844 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GPR75-ASB3A0A0A6YYF3 556 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ANXA2P2A6NMY6 339 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 RFXANKO14593 260 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 RSL1D1O76021 490 aaKnown RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 ANXA2P07355 339 aaKnown RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 TAF13Q15543 124 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ZNF311Q5JNZ3 666 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 OGFOD2Q6N063 350 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 DCDC5Q6ZRR9 648 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 FAM20CQ8IXL6 584 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 KDM1BQ8NB78 822 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SLC45A3Q96JT2 553 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 PELOQ9BRX2 385 aaKnown RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 ZNF341Q9BYN7 854 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ALG9Q9H6U8 611 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ASB3Q9Y575 518 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 hCG_1818297A0A087WSY0 165 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 S100A8P05109 93 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 MARC1Q5VT66 337 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ATCAYQ86WG3 371 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 DUSP9Q99956 384 aaKnown RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 FAM49AQ9H0Q0 323 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 SPON1Q9HCB6 807 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 MST1RQ04912 1400 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TNFRSF11BO00300 401 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GRAPQ13588 217 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 NOXA1Q86UR1 476 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GRAPLQ8TC17 118 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 MARK4Q96L34 752 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GAD1Q99259 594 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 C12orf65Q9H3J6 166 aaKnown RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 TRPV4Q9HBA0 871 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 UFSP2Q9NUQ7 469 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ZIM2Q9NZV7 527 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 PPP4R1LQ9P1A2 415 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SSX4O60224 188 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GRAP2O75791 330 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 ARF4P18085 180 aaPredicted RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 CHRNA5P30532 468 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 TROAPQ12815 778 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 SMAD1Q15797 465 aaKnown RBP8.69□□□□□ -1.02
TTC28-208ENST00000612946 PIGGQ5H8A4 983 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 KCNT2Q6UVM3 1135 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 RELL1Q8IUW5 271 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 HS6ST3Q8IZP7 471 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 GANCQ8TET4 914 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 HEXDCQ8WVB3 486 aa8.69□□□□□ -1.02
TTC28-208ENST00000612946 KLHL6Q8WZ60 621 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms