RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 ATP1B2P14415 290 aaPredicted RBP14.05□□□□□ -0.16
HDDC2-209ENST00000609477 NSG1P42857 185 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 ETF1P62495 437 aaKnown RBP14.05□□□□□ -0.16
HDDC2-209ENST00000609477 GPLD1P80108 840 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 B4GALNT1Q00973 533 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 ITIH4Q14624 930 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 RTP5Q14D33 572 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 ISXQ2M1V0 245 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 ZRANB3Q5FWF4 1079 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.05□□□□□ -0.16
HDDC2-209ENST00000609477 AFTPHQ6ULP2 937 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 CRTC3Q6UUV7 619 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 PCGF5Q86SE9 256 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 RBM12BQ8IXT5 1001 aaKnown RBP14.05□□□□□ -0.16
HDDC2-209ENST00000609477 KDF1Q8NAX2 398 aaPredicted RBP14.05□□□□□ -0.16
HDDC2-209ENST00000609477 OR2L2Q8NH16 312 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 SLC37A2Q8TED4 501 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 NXPE2Q96DL1 559 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 EPB41L1Q9H4G0 881 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 XAB2Q9HCS7 855 aaKnown RBP14.05□□□□□ -0.16
HDDC2-209ENST00000609477 PIH1D1Q9NWS0 290 aaKnown RBP14.05□□□□□ -0.16
HDDC2-209ENST00000609477 SLC23A2Q9UGH3 650 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 ACSL5Q9ULC5 683 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 MYLKQ15746 1914 aa14.05□□□□□ -0.16
HDDC2-209ENST00000609477 AKAP13Q12802 2813 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 FAM149AA5PLN7 773 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 TRABD2BA6NFA1 517 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 OR2AG2A6NM03 316 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 SMAPO00193 183 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 GPR39O43194 453 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 CPNE6O95741 557 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 RPLP0P05388 317 aaKnown RBP14.04□□□□□ -0.16
HDDC2-209ENST00000609477 HALP42357 657 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 PRLHRP49683 370 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 CTSCP53634 463 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 EPHA4P54764 986 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 MAZP56270 477 aaKnown RBP14.04□□□□□ -0.16
HDDC2-209ENST00000609477 PRAMEP78395 509 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 CCL7P80098 99 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 HHEXQ03014 270 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 EIF3IQ13347 325 aaKnown RBP14.04□□□□□ -0.16
HDDC2-209ENST00000609477 PPP1R7Q15435 360 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 TRIP13Q15645 432 aaPredicted RBP14.04□□□□□ -0.16
HDDC2-209ENST00000609477 CCDC38Q502W7 563 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 AARS2Q5JTZ9 985 aaKnown RBP14.04□□□□□ -0.16
HDDC2-209ENST00000609477 FNBP1LQ5T0N5 605 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 METRNLQ641Q3 311 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 PACS1Q6VY07 963 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 TAS2R42Q7RTR8 314 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 SERPINA9Q86WD7 417 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 LSMEM2Q8N112 164 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 OR4L1Q8NH43 312 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 CPT1BQ92523 772 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 HDAC10Q969S8 669 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 TMEM159Q96B96 161 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 SGF29Q96ES7 293 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 TMEM74Q96NL1 305 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 KIFC1Q9BW19 673 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 OSGEPL1Q9H4B0 414 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 SMARCAL1Q9NZC9 954 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 CPNE7Q9UBL6 633 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 RABGEF1Q9UJ41 708 aa14.04□□□□□ -0.16
HDDC2-209ENST00000609477 A0A1W2PQM1 296 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CCDC162PA2VCL2 907 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 D6RAR5 112 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 PPM1DO15297 605 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 SNX2O60749 519 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CSO75390 466 aaKnown RBP14.03□□□□□ -0.16
HDDC2-209ENST00000609477 ALDH4A1P30038 563 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CASQ1P31415 396 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CCKBRP32239 447 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 FOXN2P32314 431 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CA5AP35218 305 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 MLLT3P42568 568 aaPredicted RBP14.03□□□□□ -0.16
HDDC2-209ENST00000609477 ARSDP51689 593 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 SESN2P58004 480 aaPredicted RBP14.03□□□□□ -0.16
HDDC2-209ENST00000609477 PTK6Q13882 451 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 IGF2-ASQ6U949 168 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 ZNF534Q76KX8 674 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 PIM3Q86V86 326 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 HOOK3Q86VS8 718 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 SFTPA2Q8IWL1 248 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 PPIL6Q8IXY8 311 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 MPP5Q8N3R9 675 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 ZFPM2Q8WW38 1151 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 PATE1Q8WXA2 126 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 LIN37Q96GY3 246 aaPredicted RBP14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CAPZA3Q96KX2 299 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CNTNAP3BQ96NU0 1288 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 SLC38A3Q99624 504 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CCM2Q9BSQ5 444 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CNTNAP3Q9BZ76 1288 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 STRADBQ9C0K7 418 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 DDX47Q9H0S4 455 aaKnown RBP14.03□□□□□ -0.16
HDDC2-209ENST00000609477 FAM96AQ9H5X1 160 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 PRDM8Q9NQV8 689 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 CHRAC1Q9NRG0 131 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 TREX1Q9NSU2 369 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 POT1Q9NUX5 634 aa14.03□□□□□ -0.16
HDDC2-209ENST00000609477 ANAPC5Q9UJX4 755 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms