RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 ECT2LQ008S8 904 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 DUSP4Q13115 394 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 SLC26A9Q7LBE3 791 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 NMUR1Q9HB89 426 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 H3BNX3 289 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 BMP6P22004 513 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 KIR3DL1P43629 444 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 EFHD2Q96C19 240 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 MLXQ9UH92 298 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 SQORQ9Y6N5 450 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 NT5C1B-RDH14C9J2C7 533 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 CDKL1Q00532 357 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 C9orf57Q5W0N0 161 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 PYHIN1Q6K0P9 492 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 OR4C6Q8NH72 309 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 IFT80Q9P2H3 777 aaPredicted RBP12.97□□□□□ -0.33
USP6NL-205ENST00000609104 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
USP6NL-205ENST00000609104 ZNF208O43345 1280 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 ATG13O75143 517 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 RBM23Q86U06 439 aaKnown RBP12.96□□□□□ -0.33
USP6NL-205ENST00000609104 LIX1Q8N485 282 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 OR5T3Q8NGG3 340 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 KMOO15229 486 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 RPS9P46781 194 aaKnown RBP12.96□□□□□ -0.33
USP6NL-205ENST00000609104 CCL23P55773 120 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 CBR4Q8N4T8 237 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 ERMAPQ96PL5 475 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-205ENST00000609104 MGME1Q9BQP7 344 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 SLIT1O75093 1534 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 MSI1O43347 362 aaKnown RBP12.96□□□□□ -0.33
USP6NL-205ENST00000609104 HOXC6P09630 235 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 ZNF155Q12901 538 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-205ENST00000609104 CAPSQ13938 189 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 UBAP2Q5T6F2 1119 aaKnown RBP12.96□□□□□ -0.33
USP6NL-205ENST00000609104 IDNKQ5T6J7 187 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 TRMOQ9BU70 441 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 OR51V1Q9H2C8 321 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 KLRC4O43908 158 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 PGLSO95336 258 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 GJA8P48165 433 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 SP140Q13342 867 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 ECM1Q16610 540 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 TMC8Q8IU68 726 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 OR10A6Q8NH74 314 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 CD84Q9UIB8 345 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 PIK3C2BO00750 1634 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 CES1P23141 567 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 ELP6Q0PNE2 266 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 DCLRE1AQ6PJP8 1040 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 LINGO2Q7L985 606 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 PHYKPLQ8IUZ5 450 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 FAM110BQ8TC76 370 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 MCCC1Q96RQ3 725 aaPredicted RBP12.96□□□□□ -0.33
USP6NL-205ENST00000609104 TESMINQ9Y4I5 508 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 PCDHB1Q9Y5F3 818 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 TRBV23OR9-2A0A075B6M9 112 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 H3BM21 787 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 HSPB3Q12988 150 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 RFKQ969G6 155 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 COMMD4Q9H0A8 199 aa12.96□□□□□ -0.33
USP6NL-205ENST00000609104 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.34
USP6NL-205ENST00000609104 ARL13AQ5H913 290 aaPredicted RBP12.96□□□□□ -0.34
USP6NL-205ENST00000609104 OR10H4Q8NGA5 316 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 HBEGFQ99075 208 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 GLOD4Q9HC38 313 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 CHRAC1Q9NRG0 131 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 MALT1Q9UDY8 824 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 FSCN2O14926 492 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 RGS8P57771 180 aaPredicted RBP12.96□□□□□ -0.34
USP6NL-205ENST00000609104 TEX44Q53QW1 395 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 ECHDC2Q86YB7 292 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 UROSP10746 265 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 ZNF234Q14588 700 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.34
USP6NL-205ENST00000609104 UPB1Q9UBR1 384 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 TRIM17Q9Y577 477 aa12.96□□□□□ -0.34
USP6NL-205ENST00000609104 EFCAB9A8MZ26 197 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 CHRM5P08912 532 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PPP3R1P63098 170 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 PPP1R15BQ5SWA1 713 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 RELTQ969Z4 430 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MED31Q9Y3C7 131 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 B4GALT5O43286 388 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 RFTN2Q52LD8 501 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 USP30Q70CQ3 517 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 DNAJA4Q8WW22 397 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 LMLNQ96KR4 655 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 KCTD15Q96SI1 283 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 FEM1AQ9BSK4 669 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 GRHL1Q9NZI5 618 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 MAFO75444 373 aaPredicted RBP12.95□□□□□ -0.34
USP6NL-205ENST00000609104 ITIH1P19827 911 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 CYP3A7P24462 503 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 CD52P31358 61 aa12.95□□□□□ -0.34
USP6NL-205ENST00000609104 IDH3AP50213 366 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms