RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SRP72O76094 671 aaKnown RBP12.09□□□□□ -0.47
CTSA-210ENST00000606000 CCDC175P0C221 793 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 AKT1P31749 480 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 SLC19A1P41440 591 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 CDKN1CP49918 316 aaPredicted RBP12.09□□□□□ -0.47
CTSA-210ENST00000606000 ARSDP51689 593 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 CLN3Q13286 438 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 ITGA9Q13797 1035 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 NFE2L1Q14494 772 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 KIR2DS5Q14953 304 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 CLCA4Q14CN2 919 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 SIX1Q15475 284 aaPredicted RBP12.09□□□□□ -0.47
CTSA-210ENST00000606000 OASLQ15646 514 aaKnown RBP12.09□□□□□ -0.47
CTSA-210ENST00000606000 PARP6Q2NL67 630 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 SNAP47Q5SQN1 464 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 ZDHHC20Q5W0Z9 365 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 TMEM220Q6QAJ8 160 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 XKR5Q6UX68 686 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 CCDC112Q8NEF3 446 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 GPR150Q8NGU9 434 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 ZNF398Q8TD17 642 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 DTX3LQ8TDB6 740 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 BRSK1Q8TDC3 778 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 JPH3Q8WXH2 748 aaPredicted RBP12.09□□□□□ -0.47
CTSA-210ENST00000606000 USP7Q93009 1102 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 AHCYL2Q96HN2 611 aaKnown RBP12.09□□□□□ -0.47
CTSA-210ENST00000606000 DNAJC1Q96KC8 554 aaKnown RBP12.09□□□□□ -0.47
CTSA-210ENST00000606000 TTC25Q96NG3 672 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 CMKLR1Q99788 373 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 ASB8Q9H765 288 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 SMOXQ9NWM0 555 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 OGFRQ9NZT2 677 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 KLHL3Q9UH77 587 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 PSMD13Q9UNM6 376 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 SLC30A1Q9Y6M5 507 aa12.09□□□□□ -0.47
CTSA-210ENST00000606000 TMX2-CTNND1H3BSU7 103 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 SGTAO43765 313 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 DUX1O43812 170 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 POP7O75817 140 aaKnown RBP12.08□□□□□ -0.48
CTSA-210ENST00000606000 ZSCAN5DPP0CG00 497 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 FGF3P11487 239 aaPredicted RBP12.08□□□□□ -0.48
CTSA-210ENST00000606000 GFERP55789 205 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 GPLD1P80108 840 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 SEPT6Q14141 434 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 POU6F1Q14863 301 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 RPS6KA1Q15418 735 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 LDLRAP1Q5SW96 308 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 FNBP1LQ5T0N5 605 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 DUS1LQ6P1R4 473 aaKnown RBP12.08□□□□□ -0.48
CTSA-210ENST00000606000 ZFAND4Q86XD8 727 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 OR4D9Q8NGE8 314 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 OR10G6Q8NH81 332 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 NCSTNQ92542 709 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 RTP4Q96DX8 246 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 RNF31Q96EP0 1072 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 STN1Q9H668 368 aaKnown RBP12.08□□□□□ -0.48
CTSA-210ENST00000606000 ARNT2Q9HBZ2 717 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 OCIAD1Q9NX40 245 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 UNC13CQ8NB66 2214 aa12.08□□□□□ -0.48
CTSA-210ENST00000606000 GOLGA6L3A6NEY3 463 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 PPFIA2O75334 1257 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 CRTAMO95727 393 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 AP2A1O95782 977 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 VIPP01282 170 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 IFNB1P01574 187 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 SLC2A4P14672 509 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 TYRP1P17643 537 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 MSH3P20585 1137 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 IDSP22304 550 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 MC4RP32245 332 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 GRIA1P42261 906 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
CTSA-210ENST00000606000 SQSTM1Q13501 440 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 P3H1Q32P28 736 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 CCDC38Q502W7 563 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 SOWAHCQ53LP3 525 aaPredicted RBP12.07□□□□□ -0.48
CTSA-210ENST00000606000 ARHGAP40Q5TG30 622 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 TMEM71Q6P5X7 295 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 ABRAXAS1Q6UWZ7 409 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 TMEM26Q6ZUK4 368 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 TRIM48Q8IWZ4 208 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 LILRA3Q8N6C8 439 aaPredicted RBP12.07□□□□□ -0.48
CTSA-210ENST00000606000 OR52K1Q8NGK4 314 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 PPP1R2P1Q96PQ5 205 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 TLR10Q9BXR5 811 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 ZCCHC2Q9C0B9 1178 aaKnown RBP12.07□□□□□ -0.48
CTSA-210ENST00000606000 LRRC40Q9H9A6 602 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 ETNK1Q9HBU6 452 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 CRLS1Q9UJA2 301 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 ZNF148Q9UQR1 794 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 PPP2R2CQ9Y2T4 447 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 PCDHGA7Q9Y5G6 932 aa12.07□□□□□ -0.48
CTSA-210ENST00000606000 CFAP20Q9Y6A4 193 aaKnown RBP12.07□□□□□ -0.48
CTSA-210ENST00000606000 URB1O60287 2271 aaKnown RBP12.07□□□□□ -0.48
CTSA-210ENST00000606000 KNTC1P50748 2209 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 OR51F1A6NGY5 319 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 LILRA5A6NI73 299 aa12.06□□□□□ -0.48
CTSA-210ENST00000606000 OR5K4A6NMS3 321 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms