RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 FBXO46Q6PJ61 603 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 STXBP4Q6ZWJ1 553 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 STX12Q86Y82 276 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 POC5Q8NA72 575 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 IL17RCQ8NAC3 791 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC2A14Q8TDB8 520 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 NRG4Q8WWG1 115 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 WFDC12Q8WWY7 111 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TOE1Q96GM8 510 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 MAP6Q96JE9 813 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZFYVE19Q96K21 471 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 DMRTA2Q96SC8 542 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CYTH2Q99418 400 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZFYVE21Q9BQ24 234 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 HEMGNQ9BXL5 484 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 DDX47Q9H0S4 455 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 P2RY12Q9H244 342 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 OR51B5Q9H339 312 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TLR8Q9NR97 1041 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 RAB20Q9NX57 234 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 MSRAQ9UJ68 235 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 PADI1Q9ULC6 663 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDHA7Q9UN72 937 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 B3GNT3Q9Y2A9 372 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 DLGAP4Q9Y2H0 992 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF175Q9Y473 711 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 AP4B1Q9Y6B7 739 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 PCDH11YQ9BZA8 1340 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A1W2PQ27 194 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A1W2PQ64 194 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 A0A1W2PQD8 194 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF716A6NP11 495 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 H0Y858 1186 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 hCG_2039718K7EN88 272 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ACOX3O15254 700 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SULT1C4O75897 302 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 LGI1O95970 557 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 GAS8O95995 478 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF735P0CB33 412 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 OR8G3PP0DMU2 310 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ITGA2P17301 1181 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SYN1P17600 705 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ITGB6P18564 788 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ATP5C1P36542 298 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CDKN1BP46527 198 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 HCAR3P49019 387 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 GDI2P50395 445 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 COPB1P53618 953 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 UBE2IP63279 158 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 NKX3-2P78367 333 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SLAQ13239 276 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 PAN2Q504Q3 1202 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 DCAF6Q58WW2 860 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 C6orf10Q5SRN2 563 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CPZQ66K79 652 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 USP17L6PQ6QN14 398 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SPRED1Q7Z699 444 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CAMK1DQ8IU85 385 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 KLHL7Q8IXQ5 586 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 FBXL6Q8N531 539 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 MINDY2Q8NBR6 621 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZNF680Q8NEM1 530 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CMASQ8NFW8 434 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 RAPGEF4Q8WZA2 1011 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SEPT8Q92599 483 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 RGMAQ96B86 450 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 C16orf58Q96GQ5 468 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 RANBP9Q96S59 729 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CINPQ9BW66 212 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 ZDHHC5Q9C0B5 715 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 KLC2Q9H0B6 622 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC32A1Q9H598 525 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 SLC35C2Q9NQQ7 365 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 NUDT15Q9NV35 164 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 GPRC5DQ9NZD1 345 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 UXTQ9UBK9 157 aaPredicted RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CNOT7Q9UIV1 285 aaKnown RBP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TUBE1Q9UJT0 475 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 DNAJC12Q9UKB3 198 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 CBLCQ9ULV8 474 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 MAD1L1Q9Y6D9 718 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 MYH2Q9UKX2 1941 aa4.98□□□□□ -1.61
SPTBN1-206ENST00000602898 TRPC5OSA6NMA1 111 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 TMEM233B4DJY2 109 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CCRL2O00421 344 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 BTN3A1O00481 513 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 GPR171O14626 319 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SSX5O60225 188 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 CCDC22O60826 627 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 DCTN3O75935 186 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 LCP1P13796 627 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 GFAPP14136 432 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 FUT1P19526 365 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 SHMT1P34896 483 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 LEPRP48357 1165 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 NRIP1P48552 1158 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 ALDH7A1P49419 539 aaKnown RBP4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 RASSF2P50749 326 aa4.97□□□□□ -1.61
SPTBN1-206ENST00000602898 NKX2-5P52952 324 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms