RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 RASSF9O75901 435 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 NDUFA10O95299 355 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 BPIP17213 487 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 TYRP1P17643 537 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 CASP14P31944 242 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 TRIM14Q14142 442 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 MESDQ14696 234 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 ATP1A1-AS1Q5TC04 95 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 CACHD1Q5VU97 1274 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 ALS2CLQ60I27 953 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 C16orf46Q6P387 395 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 CRTC3Q6UUV7 619 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 KMT5CQ86Y97 462 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 BEND7Q8N7W2 519 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 ZFPM2Q8WW38 1151 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 TEKT5Q96M29 485 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 GLOD4Q9HC38 313 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 SCHIP1Q9P0W5 487 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 KCNMB2Q9Y691 235 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 SLC30A1Q9Y6M5 507 aa17.51■□□□□ 0.39
SHKBP1-227ENST00000602011 A0A0A6YYK5 440 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 AKR1B10O60218 316 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 NELFEP18615 380 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 GFERP55789 205 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 DMPKQ09013 629 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 TFDP2Q14188 446 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 ASTE1Q2TB18 679 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 LDLRAP1Q5SW96 308 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 AMZ2Q86W34 360 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 TEX19Q8NA77 164 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 SLC35G2Q8TBE7 412 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 ZNF514Q96K75 400 aaPredicted RBP17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 CD180Q99467 661 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 VAT1Q99536 393 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 GPR87Q9BY21 358 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 FAM153AQ9UHL3 310 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 CROTQ9UKG9 612 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 DNAJC16Q9Y2G8 782 aa17.5■□□□□ 0.39
SHKBP1-227ENST00000602011 NBPF19A0A087WUL8 3843 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 UTP20O75691 2785 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 LOC285095A0A1B0GVY8 99 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 C3orf70A6NLC5 250 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 SPAG6O75602 509 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 TPM1P09493 284 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 BRAFP15056 766 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 SEPHS1P49903 392 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 ACY1Q03154 408 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 PCSK7Q16549 785 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 ATCAYQ86WG3 371 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 TRAPPC5Q8IUR0 188 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 ZNF547Q8IVP9 402 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 RHOT1Q8IXI2 618 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 CARFQ8N187 725 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 GDAP1Q8TB36 358 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 LRRN4Q8WUT4 740 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 ARFGAP3Q9NP61 516 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 IFNKQ9P0W0 207 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 PLAAQ9Y263 795 aa17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 SPENQ96T58 3664 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-227ENST00000602011 CREG1O75629 220 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 KIAA0754O94854 1291 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 PYGMP11217 842 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 FECHP22830 423 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 RPL10P27635 214 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 ITGA9Q13797 1035 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 GPR18Q14330 331 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 TCEAL1Q15170 157 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 ATP13A5Q4VNC0 1218 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 ZNF648Q5T619 568 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 C11orf96Q7Z7L8 435 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 CPNE8Q86YQ8 564 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 RFX6Q8HWS3 928 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 APLFQ8IW19 511 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 GALNT6Q8NCL4 622 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 OR8K5Q8NH50 307 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 TFB1MQ8WVM0 346 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 THAP4Q8WY91 577 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 SLC41A2Q96JW4 573 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 DNAJC7Q99615 494 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 LHX9Q9NQ69 397 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 RARRES3Q9UL19 164 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 INTUQ9ULD6 942 aa17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 USP9YO00507 2555 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-227ENST00000602011 CLEC18AA5D8T8 446 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 CBFA2T2O43439 604 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 KATNA1O75449 491 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 RFPL1O75677 317 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 PIRTP0C851 137 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 ZNF28P17035 718 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 NR1D1P20393 614 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 F8A1P23610 371 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 LEPRP48357 1165 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 CD97P48960 835 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 SH3BP2P78314 561 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 PDE1BQ01064 536 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 HIST2H2BCQ6DN03 193 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 IRGCQ6NXR0 463 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 CLEC18BQ6UXF7 455 aa17.47■□□□□ 0.39
SHKBP1-227ENST00000602011 SIDT2Q8NBJ9 832 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms