RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 KDM4CQ9H3R0 1056 aa17.77■□□□□ 0.43
VRK3-225ENST00000601912 ALG9Q9H6U8 611 aa17.77■□□□□ 0.43
VRK3-225ENST00000601912 LTB4R2Q9NPC1 389 aa17.77■□□□□ 0.43
VRK3-225ENST00000601912 LATS2Q9NRM7 1088 aa17.77■□□□□ 0.43
VRK3-225ENST00000601912 FGFR1OP2Q9NVK5 253 aa17.77■□□□□ 0.43
VRK3-225ENST00000601912 MTF2Q9Y483 593 aaPredicted RBP17.77■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3DA0A087WVF3 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3IA0A087WXS9 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3EA0A087X179 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3KA0A087X1G2 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 CCDC189A1A4V9 331 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 KRBA1A5PL33 1030 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3FA6NER0 549 aaPredicted RBP17.76■□□□□ 0.43
VRK3-225ENST00000601912 TARM1B6A8C7 271 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3LB9A6J9 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 KPNA5O15131 536 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 ZBTB14O43829 449 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TRIM13O60858 407 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 H2AFYO75367 372 aaKnown RBP17.76■□□□□ 0.43
VRK3-225ENST00000601912 SOD1P00441 154 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3HP0C7X1 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 DGKAP23743 735 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 GRK2P25098 689 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TMEM115Q12893 351 aaPredicted RBP17.76■□□□□ 0.43
VRK3-225ENST00000601912 SEL1L3Q68CR1 1132 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3GQ6DHY5 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3CQ6IPX1 549 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 CPNE9Q8IYJ1 553 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TBC1D3Q8IZP1 549 aaPredicted RBP17.76■□□□□ 0.43
VRK3-225ENST00000601912 RHEBL1Q8TAI7 183 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 NAT14Q8WUY8 206 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 EEF1AKMT1Q8WVE0 214 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 CCDC126Q96EE4 140 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 SGF29Q96ES7 293 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 LINGO1Q96FE5 620 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 PDLIM5Q96HC4 596 aaKnown RBP17.76■□□□□ 0.43
VRK3-225ENST00000601912 OXSMQ9NWU1 459 aa17.76■□□□□ 0.43
VRK3-225ENST00000601912 TRPM6Q9BX84 2022 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 A0A1W2PQU0 124 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 PRR23AA6NEV1 266 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 FAM170BA6NMN3 283 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 K7ESM1 405 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 RNGTTO60942 597 aaKnown RBP17.75■□□□□ 0.43
VRK3-225ENST00000601912 FTH1P02794 183 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 SBK3P0C264 359 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 GABRG2P18507 467 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 STX3Q13277 289 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 MAP7D1Q3KQU3 841 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 PNCKQ6P2M8 343 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 FAM47EQ6ZV65 393 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 FAM124AQ86V42 546 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 HORMAD1Q86X24 394 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 SIX5Q8N196 739 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 PGBD3Q8N328 593 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 FLCNQ8NFG4 579 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 STAG3L4Q8TBR4 150 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 LKAAEAR1Q8TD35 194 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 HMGB4Q8WW32 186 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 KIAA1191Q96A73 305 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 GRAMD1AQ96CP6 724 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 HIC2Q96JB3 615 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 C1QTNF2Q9BXJ5 285 aa17.75■□□□□ 0.43
VRK3-225ENST00000601912 CNOT6Q9ULM6 557 aaKnown RBP17.75■□□□□ 0.43
VRK3-225ENST00000601912 ZFR2Q9UPR6 939 aaKnown RBP17.75■□□□□ 0.43
VRK3-225ENST00000601912 SERPINE1P05121 402 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 PCCBP05166 539 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 FGF3P11487 239 aaPredicted RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 ATP5F1P24539 256 aaPredicted RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 TPMTP51580 245 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 BST1Q10588 318 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 GTF2H3Q13889 308 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 WSCD2Q2TBF2 565 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 KHDC1Q4VXA5 237 aaKnown RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 LIPMQ5VYY2 423 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 ADAMTSL4Q6UY14 1074 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 SPNS2Q8IVW8 549 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 PELI3Q8N2H9 469 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 ZNF473Q8WTR7 871 aaKnown RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 PTERQ96BW5 349 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 SLC17A9Q9BYT1 436 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 OSBPL6Q9BZF3 934 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 EPHX3Q9H6B9 360 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 TRIM39Q9HCM9 518 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 SLCO1B3Q9NPD5 702 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 PIKFYVEQ9Y2I7 2098 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 SYCE1LA8MT33 242 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 EDF1O60869 148 aaKnown RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 SMIM24O75264 130 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 CDK14O94921 469 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 TSPAN12O95859 305 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 PAK4O96013 591 aaPredicted RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 CBSLP0DN79 551 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 CBSP35520 551 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 TMEM259Q4ZIN3 620 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 ZNF648Q5T619 568 aaPredicted RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 GKAP1Q5VSY0 366 aaPredicted RBP17.74■□□□□ 0.43
VRK3-225ENST00000601912 ZCCHC23Q6ZST2 131 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 SLC22A9Q8IVM8 553 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 MYO1HQ8N1T3 1032 aa17.74■□□□□ 0.43
VRK3-225ENST00000601912 RASGEF1AQ8N9B8 481 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms