RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	SH3KBP1	Q96B97	665 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	NAF1	Q96HR8	494 aa	Known RBP	15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	CCDC74B	Q96LY2	380 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	DPYSL5	Q9BPU6	564 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	ASB8	Q9H765	288 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	WASH6P	Q9NQA3	447 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	TMEM9	Q9P0T7	183 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	CPNE7	Q9UBL6	633 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	PISD	Q9UG56	409 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF148	Q9UQR1	794 aa		15.23	■□□□□ 0.03
PLD3-223	ENST00000600948	LILRA5	A6NI73	299 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	OR2AG2	A6NM03	316 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	PDZK1P1	A8MUH7	402 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	AGRP	O00253	132 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	CCL22	O00626	93 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	DUX1	O43812	170 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	POP7	O75817	140 aa	Known RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	IFNB1	P01574	187 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	JMJD7	P0C870	316 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	THRA	P10827	490 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	TPH1	P17752	444 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	XRCC1	P18887	633 aa	Predicted RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	ITIH1	P19827	911 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	IDS	P22304	550 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	RPL10	P27635	214 aa	Known RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	AKT1	P31749	480 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	HADHA	P40939	763 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	SLC19A1	P41440	591 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	EPHA4	P54764	986 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	TLE3	Q04726	772 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	DMPK	Q09013	629 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	TRA2A	Q13595	282 aa	Known RBP eCLIP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	SNX1	Q13596	522 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	SEPT7	Q16181	437 aa	Known RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	CCNG2	Q16589	344 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	AGAP9	Q5VTM2	703 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	TMEM220	Q6QAJ8	160 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	MICALCL	Q6ZW33	695 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	PRUNE1	Q86TP1	453 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	PDZD3	Q86UT5	571 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	RCBTB1	Q8NDN9	531 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	OR10G6	Q8NH81	332 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	DNAJC1	Q96KC8	554 aa	Known RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	CMKLR1	Q99788	373 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	UCK1	Q9HA47	277 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	ETNK1	Q9HBU6	452 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	PIH1D1	Q9NWS0	290 aa	Known RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF624	Q9P2J8	865 aa	Predicted RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	PDP2	Q9P2J9	529 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	PCDHGA7	Q9Y5G6	932 aa		15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	15.22	■□□□□ 0.03
PLD3-223	ENST00000600948	ERI2	A8K979	691 aa	Known RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948		H7C0S8	307 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	HGS	O14964	777 aa	Predicted RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	SGTA	O43765	313 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	KCNJ13	O60928	360 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	ETS1	P14921	441 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	VCL	P18206	1134 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	MSH3	P20585	1137 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	ITGAL	P20701	1170 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	SLC5A2	P31639	672 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	FDFT1	P37268	417 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	DRG2	P55039	364 aa	Known RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	SEPT6	Q14141	434 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	POU6F1	Q14863	301 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	LONRF2	Q1L5Z9	754 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	TMEM71	Q6P5X7	295 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	SNX20	Q7Z614	316 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	LINC00523	Q86TU6	105 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	AMZ2	Q86W34	360 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	NXPE1	Q8N323	547 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	GLIS1	Q8NBF1	620 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	OR52K1	Q8NGK4	314 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	NAT14	Q8WUY8	206 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	KCNE4	Q8WWG9	221 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	CCDC97	Q96F63	343 aa	Predicted RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	AHCYL2	Q96HN2	611 aa	Known RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	ZNF514	Q96K75	400 aa	Predicted RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	TBC1D10A	Q9BXI6	508 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	NLE1	Q9NVX2	485 aa	Predicted RBP	15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	CRLS1	Q9UJA2	301 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	ACSL6	Q9UKU0	697 aa		15.21	■□□□□ 0.03
PLD3-223	ENST00000600948	CACNA1G	O43497	2377 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	SDK2	Q58EX2	2172 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	TRBV5-4	A0A0C4DH59	114 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	OR52A4P	A6NMU1	304 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	NVL	O15381	856 aa	Known RBP	15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	SUN1	O94901	812 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	VIP	P01282	170 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	FGG	P02679	453 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	MPST	P25325	297 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	PSMA3	P25788	255 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	MC4R	P32245	332 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	SEMA5A	Q13591	1074 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	NFE2L1	Q14494	772 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	FNBP1L	Q5T0N5	605 aa		15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	DRICH1	Q6PGQ1	229 aa	Predicted RBP	15.2	■□□□□ 0.02
PLD3-223	ENST00000600948	WDR74	Q6RFH5	385 aa	Predicted RBP	15.2	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms