RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 FNDC3AQ9Y2H6 1198 aaKnown RBP11.52□□□□□ -0.57
CHMP2A-207ENST00000600804 ZFC3H1O60293 1989 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 A0A087WUV0 522 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 A0A1B0GTW7 788 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 CACNB4O00305 520 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 QSOX1O00391 747 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 VILLO15195 856 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 BCAT2O15382 392 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 VEGFDO43915 354 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A9O60656 530 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 SLC25A14O95258 325 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 ZIC2O95409 532 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 GNSP15586 552 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A6P19224 532 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A1P22309 533 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A4P22310 534 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 KELP23276 732 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 RPS3P23396 243 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■■■□□ 16.9
CHMP2A-207ENST00000600804 CD38P28907 300 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A3P35503 534 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A5P35504 534 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 LEPRP48357 1165 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 AFF3P51826 1226 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 PTK2BQ14289 1009 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 NFATC4Q14934 902 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 HSP90AA5PQ58FG0 334 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 ZRANB3Q5FWF4 1079 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 GPRC6AQ5T6X5 926 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 TEDDM1Q5T9Z0 273 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 DBX2Q6ZNG2 339 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 PTAR1Q7Z6K3 402 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 SERPINA9Q86WD7 417 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 LRRC6Q86X45 466 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 SNX19Q92543 992 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 FUBP1Q96AE4 644 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 SKA1Q96BD8 255 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 ZNF514Q96K75 400 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 SLC6A18Q96N87 628 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 CYTH2Q99418 400 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 COPS8Q99627 209 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 ZCCHC2Q9C0B9 1178 aaKnown RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 RMI1Q9H9A7 625 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 VPS37BQ9H9H4 285 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 PPCSQ9HAB8 311 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A7Q9HAW7 530 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A10Q9HAW8 530 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 UGT1A8Q9HAW9 530 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 TRIM39Q9HCM9 518 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 FZD3Q9NPG1 666 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 MARCH4Q9P2E8 410 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 CRLS1Q9UJA2 301 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 FBXO5Q9UKT4 447 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 CORO1CQ9ULV4 474 aaPredicted RBP11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 SLC17A4Q9Y2C5 497 aa11.51□□□□□ -0.57
CHMP2A-207ENST00000600804 LRP4O75096 1905 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ZNF462Q96JM2 2506 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 SPTY2D1-AS1A0A0U1RR47 76 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 OR51F1A6NGY5 319 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 CFAP99D6REC4 459 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 F8W8V4 182 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 CHUKO15111 745 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 AP2A2O94973 939 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ACSL3O95573 720 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 S1PR4O95977 384 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 GSTM1P09488 218 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 NUDT17P0C025 328 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ERVK-10P10266 1014 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 RALBP11234 206 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ZNF7P17097 686 aaPredicted RBP11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 HTR1BP28222 390 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 CA5AP35218 305 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 NSG1P42857 185 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 GSTM4Q03013 218 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 UAP1Q16222 522 aaPredicted RBP11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 DBN1Q16643 649 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 KLHL38Q2WGJ6 581 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 BEND6Q5SZJ8 279 aaPredicted RBP11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ZNF470Q6ECI4 717 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 MACC1Q6ZN28 852 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 Q6ZSR6 202 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 MARK2Q7KZI7 788 aaKnown RBP11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 TMPRSS7Q7RTY8 843 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 UNC5BQ8IZJ1 945 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 RBFAQ8N0V3 343 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 FBF1Q8TES7 1133 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 KLHDC7BQ96G42 594 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 CPNE1Q99829 537 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 MCMBPQ9BTE3 642 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 GAREM1Q9H706 876 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ERVMER34-1Q9H9K5 563 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ZFATQ9P243 1243 aa11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 DNMT3AQ9Y6K1 912 aaPredicted RBP11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 ARHGEF17Q96PE2 2063 aaPredicted RBP11.5□□□□□ -0.57
CHMP2A-207ENST00000600804 TDRD6O60522 2096 aaKnown RBP11.49□□□□□ -0.57
CHMP2A-207ENST00000600804 KLHL33A6NCF5 533 aa11.49□□□□□ -0.57
CHMP2A-207ENST00000600804 GOLGA8CPA6NN73 597 aa11.49□□□□□ -0.57
CHMP2A-207ENST00000600804 GOLGA8KD6RF30 607 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms