RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 RTP2Q5QGT7 225 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 EFL1Q7Z2Z2 1120 aaKnown RBP20■□□□□ 0.79
SHKBP1-225ENST00000600733 GPR141Q7Z602 305 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 CLVS1Q8IUQ0 354 aaPredicted RBP20■□□□□ 0.79
SHKBP1-225ENST00000600733 TNIP2Q8NFZ5 429 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 MAGEE2Q8TD90 523 aaPredicted RBP20■□□□□ 0.79
SHKBP1-225ENST00000600733 NACA2Q9H009 215 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 MUC13Q9H3R2 512 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 PREBQ9HCU5 417 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 ARIH1Q9Y4X5 557 aaPredicted RBP20■□□□□ 0.79
SHKBP1-225ENST00000600733 TRIM64CA6NLI5 447 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 ANKRD66B4E2M5 251 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 NT5C1B-RDH14C9J2C7 533 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 CLOCKO15516 846 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 TTPAP49638 278 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 HTR6P50406 440 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 KPNA1P52294 538 aaPredicted RBP20■□□□□ 0.79
SHKBP1-225ENST00000600733 OR4D2P58180 307 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 PLA2G4EQ3MJ16 856 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 RALGPS2Q86X27 583 aaPredicted RBP20■□□□□ 0.79
SHKBP1-225ENST00000600733 BIRC7Q96CA5 298 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 DNMT3LQ9UJW3 386 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 FADS3Q9Y5Q0 445 aa20■□□□□ 0.79
SHKBP1-225ENST00000600733 hCG_2014768A0A024R1R8 64 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 FAM234BA2RU67 622 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 SLC38A8A6NNN8 435 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 E5RI56 91 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 VARSP26640 1264 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 EEFSECP57772 596 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 AAK1Q2M2I8 961 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 ATP6AP1LQ52LC2 224 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 CYBRD1Q53TN4 286 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 LINGO4Q6UY18 593 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 SFRP1Q8N474 314 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 DRAXINQ8NBI3 349 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 VPS50Q96JG6 964 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 RIC8BQ9NVN3 520 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 MARCH5Q9NX47 278 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 SMPD3Q9NY59 655 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 TUBA8Q9NY65 449 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 ZIM2Q9NZV7 527 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 STX7O15400 261 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 SNAP29O95721 258 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 F11P03951 625 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 RHOCP08134 193 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 PRKAR2AP13861 404 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 ELNP15502 786 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 ATP5C1P36542 298 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 RPS9P46781 194 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 TAS2R42Q7RTR8 314 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 TBC1D21Q8IYX1 336 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 PAPD5Q8NDF8 572 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 ISOC1Q96CN7 298 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 PPM1MQ96MI6 270 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 ZNF382Q96SR6 550 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 PTBP2Q9UKA9 531 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 CDC14AQ9UNH5 594 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 VPS9D1Q9Y2B5 631 aa19.99■□□□□ 0.79
SHKBP1-225ENST00000600733 KLKB1P03952 638 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 CAPN1P07384 714 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 PSMA3P25788 255 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 SLC11A2P49281 568 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 EMP3P54852 163 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 FCGRTP55899 365 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 ESRRGP62508 458 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 EMX2Q04743 252 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 TRAF2Q12933 501 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 PRKG2Q13237 762 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 DCTN2Q13561 401 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 SELPLGQ14242 412 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 TBPL2Q6SJ96 375 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 C16orf59Q7L2K0 433 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 ZFAND4Q86XD8 727 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 DHRSXQ8N5I4 330 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 TTC16Q8NEE8 873 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 RNF145Q96MT1 663 aa19.98■□□□□ 0.79
SHKBP1-225ENST00000600733 TYW5A2RUC4 315 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 TRIM64A6NGJ6 449 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 TSPAN3O60637 253 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 LDLRP01130 860 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 ENO2P09104 434 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 CAPGP40121 348 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 MTPNP58546 118 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 PLIN5Q00G26 463 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 ZBED5Q49AG3 693 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 AASDHQ4L235 1098 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 IL27RAQ6UWB1 636 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 PRSS55Q6UWB4 352 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 TMEM173Q86WV6 379 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 ABI1Q8IZP0 508 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 METTL6Q8TCB7 284 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 KCNJ9Q92806 393 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 ISG20Q96AZ6 181 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 CCDC97Q96F63 343 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 CHID1Q9BWS9 393 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 LRRC3Q9BY71 257 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 SEZ6LQ9BYH1 1024 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 G6PDP11413 515 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 HTR1EP28566 365 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 TAS1R1Q7RTX1 841 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms