RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 ARL5AQ9Y689 179 aa12.58□□□□□ -0.4
UPF1-208ENST00000600012 A0A0J9YYE9 177 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 ZCWPW2A0A1B0GU75 182 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 TLDC2A0PJX2 215 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 MAGEB16A2A368 324 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 POC1B-GALNT4F8VUJ3 575 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 CCL22O00626 93 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 TOR1BO14657 336 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 AURKAO14965 403 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 AREL1O15033 823 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 LDB2O43679 373 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 TRBC1P01850 177 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 C1QAP02745 245 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 IGFALSP35858 605 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 MLLT3P42568 568 aaPredicted RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 EIF3BP55884 814 aaKnown RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 RPL26P61254 145 aaKnown RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 YPEL5P62699 121 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 TMPRSS15P98073 1019 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 VAC14Q08AM6 782 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 GRM3Q14832 879 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 KRT71Q3SY84 523 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 KBTBD12Q3ZCT8 623 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 PRRT3Q5FWE3 981 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 LRRC73Q5JTD7 316 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 TSTD2Q5T7W7 516 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 TMEM135Q86UB9 458 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 PHACTR4Q8IZ21 702 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 RBFAQ8N0V3 343 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 PTCD2Q8WV60 388 aaKnown RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 SNRNP27Q8WVK2 155 aaKnown RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 CENPTQ96BT3 561 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 CCDC97Q96F63 343 aaPredicted RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 CERS2Q96G23 380 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 DNAJC1Q96KC8 554 aaKnown RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 ZNF641Q96N77 438 aaPredicted RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 SLC46A1Q96NT5 459 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 BOCQ9BWV1 1114 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 C1QTNF7Q9BXJ2 289 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 CTNNAL1Q9UBT7 734 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 RPL26L1Q9UNX3 145 aaKnown RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 ZNF711Q9Y462 761 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 FAM169AQ9Y6X4 670 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
UPF1-208ENST00000600012 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
UPF1-208ENST00000600012 A0A1W2PNU3 283 aaPredicted RBP12.56□□□□□ -0.4
UPF1-208ENST00000600012 TSPAN11A1L157 253 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 FAM159BA6NKW6 160 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 CXorf49A8MYA2 514 aaPredicted RBP12.56□□□□□ -0.4
UPF1-208ENST00000600012 GOLGA8KD6RF30 607 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 LMO7DNF2Z398 122 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 GOLGA8TH3BQL2 631 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 TM7SF2O76062 418 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 ANXA6P08133 673 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 ERVK-10P10266 1014 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 GCAP28676 217 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 TAF1AQ15573 450 aaPredicted RBP12.56□□□□□ -0.4
UPF1-208ENST00000600012 KLHL38Q2WGJ6 581 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 PERM1Q5SV97 790 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 C6orf132Q5T0Z8 1188 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 CRTC1Q6UUV9 634 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 MACC1Q6ZN28 852 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 LYSMD3Q7Z3D4 306 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 CTAGE3PQ8IX95 158 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 SLC35F3Q8IY50 421 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 TTC30BQ8N4P2 665 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 PPM1NQ8N819 430 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 OR13C4Q8NGS5 318 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 BRSK1Q8TDC3 778 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 LRRC61Q9BV99 259 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 SLC13A1Q9BZW2 595 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 CENPHQ9H3R5 247 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 PPANQ9NQ55 473 aaKnown RBP12.56□□□□□ -0.4
UPF1-208ENST00000600012 TREX1Q9NSU2 369 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 C20orf96Q9NUD7 363 aaPredicted RBP12.56□□□□□ -0.4
UPF1-208ENST00000600012 MOCS1Q9NZB8 636 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 PHTF1Q9UMS5 762 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 LRP4O75096 1905 aa12.56□□□□□ -0.4
UPF1-208ENST00000600012 AHCTF1Q8WYP5 2266 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 MROH6A6NGR9 719 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 A8MX80 341 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 CDRT15L2A8MXV6 281 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 RASGRF2O14827 1237 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 UGT1A9O60656 530 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 CRTAMO95727 393 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 IVLP07476 585 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 F7P08709 466 aaPredicted RBP12.55□□□□□ -0.4
UPF1-208ENST00000600012 ARNTP27540 789 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 ARSDP51689 593 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 ZNF140P52738 457 aaPredicted RBP12.55□□□□□ -0.4
UPF1-208ENST00000600012 PPARDQ03181 441 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 MGAT5Q09328 741 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 C1orf61Q13536 156 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 SPIDRQ14159 915 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 CNGA3Q16281 694 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 KIAA0930Q6ICG6 404 aaPredicted RBP12.55□□□□□ -0.4
UPF1-208ENST00000600012 TTC7BQ86TV6 843 aa12.55□□□□□ -0.4
UPF1-208ENST00000600012 TSPAN33Q86UF1 283 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms