RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 RPS3P23396 243 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 RPIAP49247 311 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 PRLHRP49683 370 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 B4GALNT1Q00973 533 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 IL9RQ01113 521 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 PLOD1Q02809 727 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 C6orf132Q5T0Z8 1188 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 TMEM220Q6QAJ8 160 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 CES3Q6UWW8 571 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 UNC5AQ6ZN44 842 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 CHST15Q7LFX5 561 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 TAF8Q7Z7C8 310 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 GALNT7Q86SF2 657 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 AMZ2Q86W34 360 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 GATAD2AQ86YP4 633 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 CILP2Q8IUL8 1156 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 ZNF547Q8IVP9 402 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 CNTN4Q8IWV2 1026 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 PALM2Q8IXS6 379 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 BEND7Q8N7W2 519 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 AVL9Q8NBF6 648 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 OR6C4Q8NGE1 309 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 GSDMBQ8TAX9 411 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 RHBDD1Q8TEB9 315 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 SETD7Q8WTS6 366 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 FMO2Q99518 471 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 FAM96AQ9H5X1 160 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 UCKL1Q9NWZ5 548 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 PCOLCE2Q9UKZ9 415 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 CHMP2BQ9UQN3 213 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 PCDHB1Q9Y5F3 818 aa16.32■□□□□ 0.2
SHKBP1-219ENST00000599575 MGAT4DA6NG13 374 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 OR5K4A6NMS3 321 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 CBFA2T3O75081 653 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 FTH1P02794 183 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 GIMD1P0DJR0 217 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 CEACAM1P13688 526 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 CA5AP35218 305 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 CDKN1CP49918 316 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 HLTFQ14527 1009 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 INSCQ1MX18 579 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 KCTD16Q68DU8 428 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 OGFOD3Q6PK18 319 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 WASH2PQ6VEQ5 465 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 C11orf96Q7Z7L8 435 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 GLRX5Q86SX6 157 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 KCNMB4Q86W47 210 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 IGDCC3Q8IVU1 814 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 OTUD6BQ8N6M0 293 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 OR2L2Q8NH16 312 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 BAHD1Q8TBE0 780 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 IFT81Q8WYA0 676 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 SGF29Q96ES7 293 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 CERS2Q96G23 380 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 PWWP2AQ96N64 755 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 BOCQ9BWV1 1114 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 ARFGAP3Q9NP61 516 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 SAYSD1Q9NPB0 183 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 WASH6PQ9NQA3 447 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 NSMCE4AQ9NXX6 385 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 DLL3Q9NYJ7 618 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 MOCS1Q9NZB8 636 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 ACSL5Q9ULC5 683 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 COMMD10Q9Y6G5 202 aa16.31■□□□□ 0.2
SHKBP1-219ENST00000599575 PRR19A6NJB7 356 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 KPNA5O15131 536 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 SH3BP5O60239 455 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 POP7O75817 140 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 ESR1P03372 595 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 CDK4P11802 303 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 ACP5P13686 325 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 IDSP22304 550 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 ACTR1BP42025 376 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 MAGEA4P43358 317 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 CTSCP53634 463 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 ACTR1AP61163 376 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 RPA4Q13156 261 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 C1orf61Q13536 156 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 SLMAPQ14BN4 828 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 TRADDQ15628 312 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 ZNF648Q5T619 568 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 AGAP9Q5VTM2 703 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 ZNF470Q6ECI4 717 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 NRROSQ86YC3 692 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 ARL10Q8N8L6 244 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 FAM46DQ8NEK8 389 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 CCM2Q9BSQ5 444 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 TAAR2Q9P1P5 351 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 MARCH4Q9P2E8 410 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 FTSJ1Q9UET6 329 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 GNPTGQ9UJJ9 305 aa16.3■□□□□ 0.2
SHKBP1-219ENST00000599575 CABIN1Q9Y6J0 2220 aa16.29■□□□□ 0.2
SHKBP1-219ENST00000599575 OR2AG2A6NM03 316 aa16.29■□□□□ 0.2
SHKBP1-219ENST00000599575 TNFSF14O43557 240 aa16.29■□□□□ 0.2
SHKBP1-219ENST00000599575 SGTAO43765 313 aa16.29■□□□□ 0.2
SHKBP1-219ENST00000599575 BANF1O75531 89 aa16.29■□□□□ 0.2
SHKBP1-219ENST00000599575 LDOC1O95751 146 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-219ENST00000599575 RHOXF2BP0C7M4 288 aa16.29■□□□□ 0.2
SHKBP1-219ENST00000599575 TNFRSF8P28908 595 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms