RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 PIM3Q86V86 326 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 PELI3Q8N2H9 469 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 NKAPQ8N5F7 415 aaKnown RBP15.25■□□□□ 0.03
UPF1-206ENST00000598471 ANKRD42Q8N9B4 389 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 RLN3Q8WXF3 142 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 INPP5DQ92835 1189 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 FAM126AQ9BYI3 521 aaPredicted RBP15.25■□□□□ 0.03
UPF1-206ENST00000598471 C6orf106Q9H6K1 298 aaPredicted RBP15.25■□□□□ 0.03
UPF1-206ENST00000598471 SPATS2LQ9NUQ6 558 aaKnown RBP15.25■□□□□ 0.03
UPF1-206ENST00000598471 KLHL42Q9P2K6 505 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 PRSS21Q9Y6M0 314 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 TRPM6Q9BX84 2022 aa15.25■□□□□ 0.03
UPF1-206ENST00000598471 GPR89AB7ZAQ6 455 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 PRAMEF26H0Y7S4 382 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 POLR3GO15318 223 aaPredicted RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 GSTM1P09488 218 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 LTA4HP09960 611 aaKnown RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 GPR89BP0CG08 455 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 ZNF37AP17032 561 aaPredicted RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 KELP23276 732 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 RGS4P49798 205 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 ATP1A2P50993 1020 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 GSTM4Q03013 218 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 ZNF460Q14592 562 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 BCL7AQ4VC05 210 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 KHDC1Q4VXA5 237 aaKnown RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 HHATQ5VTY9 493 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 KYAT3Q6YP21 454 aaKnown RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 OTOAQ7RTW8 1153 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 ADGRG6Q86SQ4 1221 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 CLEC14AQ86T13 490 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 TRIM74Q86UV6 250 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 RASGEF1AQ8N9B8 481 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 SIDT2Q8NBJ9 832 aaKnown RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 CADM4Q8NFZ8 388 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 CD200R1Q8TD46 325 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 TCP10LQ8TDR4 215 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 CCDC97Q96F63 343 aaPredicted RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 MYOCQ99972 504 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 APOOQ9BUR5 198 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 OR2AG1Q9H205 316 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 FZD3Q9NPG1 666 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 PRMT8Q9NR22 394 aaPredicted RBP15.24■□□□□ 0.03
UPF1-206ENST00000598471 MID2Q9UJV3 735 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 DHRS7Q9Y394 339 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 HS3ST3A1Q9Y663 406 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 TRIOO75962 3097 aa15.24■□□□□ 0.03
UPF1-206ENST00000598471 PLXNB3Q9ULL4 1909 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 IQCF5A8MTL0 148 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 C10orf142B7Z368 130 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 RAD51BO15315 384 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 MAP3K13O43283 966 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 KLHL2O95198 593 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 IGHV4-34P06331 123 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 APOA4P06727 396 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 HOXC4P09017 264 aaPredicted RBP15.23■□□□□ 0.03
UPF1-206ENST00000598471 CCDC166P0CW27 439 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 ITGB6P18564 788 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 DGKAP23743 735 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 RPA3P35244 121 aaPredicted RBP15.23■□□□□ 0.03
UPF1-206ENST00000598471 PRLHRP49683 370 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 CLCN7P51798 805 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 KIAA1024LP59773 190 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 IL2P60568 153 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 IRF9Q00978 393 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 ZNF648Q5T619 568 aaPredicted RBP15.23■□□□□ 0.03
UPF1-206ENST00000598471 LRRC8EQ6NSJ5 796 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 DOK6Q6PKX4 331 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 TMEM220Q6QAJ8 160 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 TRAPPC5Q8IUR0 188 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 ZBTB2Q8N680 514 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 FAM174AQ8TBP5 190 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 KCTD4Q8WVF5 259 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 SNX19Q92543 992 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 FOXJ1Q92949 421 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 FUBP1Q96AE4 644 aaKnown RBP15.23■□□□□ 0.03
UPF1-206ENST00000598471 FAM136AQ96C01 138 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 BIRC7Q96CA5 298 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 SGF29Q96ES7 293 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 SCYL1Q96KG9 808 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 NMRAL1Q9HBL8 299 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 LATS2Q9NRM7 1088 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 INTS9Q9NV88 658 aaKnown RBP15.23■□□□□ 0.03
UPF1-206ENST00000598471 ATXN10Q9UBB4 475 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 GPR34Q9UPC5 381 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 MED16Q9Y2X0 877 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.23■□□□□ 0.03
UPF1-206ENST00000598471 PLLPQ9Y342 182 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 OR1A2Q9Y585 309 aa15.23■□□□□ 0.03
UPF1-206ENST00000598471 OR2AG2A6NM03 316 aa15.22■□□□□ 0.03
UPF1-206ENST00000598471 A6NNZ2 444 aa15.22■□□□□ 0.03
UPF1-206ENST00000598471 EIF3FO00303 357 aaPredicted RBP15.22■□□□□ 0.03
UPF1-206ENST00000598471 WISP3O95389 354 aaPredicted RBP15.22■□□□□ 0.03
UPF1-206ENST00000598471 CBSLP0DN79 551 aa15.22■□□□□ 0.03
UPF1-206ENST00000598471 ENO3P13929 434 aaPredicted RBP15.22■□□□□ 0.03
UPF1-206ENST00000598471 CHN1P15882 459 aa15.22■□□□□ 0.03
UPF1-206ENST00000598471 HTR1BP28222 390 aa15.22■□□□□ 0.03
UPF1-206ENST00000598471 CBSP35520 551 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms