RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SKIV2L2P42285 1042 aaKnown RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 CLCN7P51798 805 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 DMWDQ09019 674 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 TSSK4Q6SA08 328 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 CLEC14AQ86T13 490 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 SIDT2Q8NBJ9 832 aaKnown RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 GIMAP7Q8NHV1 300 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 SNX19Q92543 992 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 FUBP1Q96AE4 644 aaKnown RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 LGR4Q9BXB1 951 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 PCED1AQ9H1Q7 454 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 CNOT10Q9H9A5 744 aaKnown RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 ATXN10Q9UBB4 475 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 DCDC2Q9UHG0 476 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 MBD1Q9UIS9 605 aaPredicted RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 DMTF1Q9Y222 760 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 INVSQ9Y283 1065 aa14.46□□□□□ -0.1
VRK3-212ENST00000596814 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.46□□□□□ -0.1
VRK3-212ENST00000596814 CCDC163A0A0D9SF12 145 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 CACNB4O00305 520 aaPredicted RBP14.45□□□□□ -0.1
VRK3-212ENST00000596814 SGTAO43765 313 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 MAGEC1O60732 1142 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 DNAJC6O75061 913 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 FTH1P02794 183 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 GSTA1P08263 222 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 COL6A2P12110 1019 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 RPA3P35244 121 aaPredicted RBP14.45□□□□□ -0.1
VRK3-212ENST00000596814 PRLHRP49683 370 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 ATP1A2P50993 1020 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 CTSCP53634 463 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 CLDN2P57739 230 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 PPARDQ03181 441 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 INSCQ1MX18 579 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 DOK6Q6PKX4 331 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 PAQR3Q6TCH7 311 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 TMEM207Q6UWW9 146 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 SLC36A4Q6YBV0 504 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 GCNT7Q6ZNI0 430 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 CDHR3Q6ZTQ4 885 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 LCA5Q86VQ0 697 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 CENPLQ8N0S6 344 aaPredicted RBP14.45□□□□□ -0.1
VRK3-212ENST00000596814 PLD6Q8N2A8 252 aaKnown RBP14.45□□□□□ -0.1
VRK3-212ENST00000596814 ANKRD42Q8N9B4 389 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 TCP10LQ8TDR4 215 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 KCTD4Q8WVF5 259 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 FOXJ1Q92949 421 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 TTC28Q96AY4 2481 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 SLC30A3Q99726 388 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 APOOQ9BUR5 198 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 EPHX3Q9H6B9 360 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 EBF2Q9HAK2 575 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 SYTL2Q9HCH5 934 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 SPATS2LQ9NUQ6 558 aaKnown RBP14.45□□□□□ -0.1
VRK3-212ENST00000596814 NKIRAS1Q9NYS0 192 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 GALPQ9UBC7 116 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 DHRS7Q9Y394 339 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 ZDBF2Q9HCK1 2354 aa14.45□□□□□ -0.1
VRK3-212ENST00000596814 POM121BA6NF01 834 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 PRAMEF26H0Y7S4 382 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 POLR3GO15318 223 aaPredicted RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 TM9SF1O15321 606 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 ZWINTO95229 277 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 CCDC166P0CW27 439 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 ZNF8P17098 575 aaPredicted RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 SLC26A3P40879 764 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 SLC18A1P54219 525 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 RPL6Q02878 288 aaKnown RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 MPP2Q14168 576 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 CSHL1Q14406 222 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 SEPT7Q16181 437 aaKnown RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 TSNAXIP1Q2TAA8 658 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 TTLL9Q3SXZ7 439 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 BCL7AQ4VC05 210 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 TMEM220Q6QAJ8 160 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 OTOAQ7RTW8 1153 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 TRAPPC5Q8IUR0 188 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 SPNS2Q8IVW8 549 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 ZBTB2Q8N680 514 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 BEND7Q8N7W2 519 aaPredicted RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 TMEM105Q8N8V8 129 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 TMEM145Q8NBT3 493 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 CADM4Q8NFZ8 388 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 ZNF514Q96K75 400 aaPredicted RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 C1QTNF1Q9BXJ1 281 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 FAM126AQ9BYI3 521 aaPredicted RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 GRID1Q9ULK0 1009 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 CA5BQ9Y2D0 317 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 TMEM98Q9Y2Y6 226 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 CEP192Q8TEP8 1941 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 A0A1W2PPC4 97 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 GPR89AB7ZAQ6 455 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 H0Y8X5 98 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 KLHL2O95198 593 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 HOXC4P09017 264 aaPredicted RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 LTA4HP09960 611 aaKnown RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 GPR89BP0CG08 455 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 TDGF1P13385 188 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 KPNA2P52292 529 aaKnown RBP14.44□□□□□ -0.1
VRK3-212ENST00000596814 KIAA1024LP59773 190 aa14.44□□□□□ -0.1
VRK3-212ENST00000596814 DLG1Q12959 904 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms